Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0210 ATGGAACCCTATCGTCCTCAGGGAAAATATTCCATCACAACCAGTTCCACTACCAATCTTCCTCTCTACCGCTCTGCTCCTCCTCTTGAAGTCAAGCTCGAAGATTTCGAGCTTTATGCTATAGATCGTCTTCGAGTTCTTAAAGGGATTTCTGATGGTTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTGGAATACCAATATGAAACATCCACAGGCATCTGAGGATGTGAACAAGGATATAATCTCTCACTTTGTTTTGCGCCTTGTATACTGCAGAACGGAGGAATTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACACCGTTTTCTTTATGCAAGTTCTGAATCTCAGAAGCAGGTCTTTGTGGAGCTTGGTCTCCCATACAGAGCAATCAGTTATGCAGAATTTGAGGCTGTAAAGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGACTGTACCAAGTGGTGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTAGTGGCTGGTCGAAGAATATTTCTCCATAAAGGATATGCATATATTGCTATGTATCAGGTGGTTTCCCTTGCTGCAACACAATTCCGCAGTTACCTATCAAAGGCCCTAAGTCTGACAAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATAGGTTGACCCCAATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGGTGATATATCAATAAAAGACCTTGACCAAATAGCTAAAAGTTCATTTCCTCTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAAAGCTGAGTTCTCCCAGAGAGTTGGTGCCGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAATTATGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAATAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTACAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACAGGACAATGGACGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCGATCCATGGCTCGTCGTGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAGAAGGTCCTTCAATCTAAGAACAATTCAACAGTCTAG 1356 41.52 MEPYRPQGKYSITTSSTTNLPLYRSAPPLEVKLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELWNTNMKHPQASEDVNKDIISHFVLRLVYCRTEELRKWFLSMETMLFRHRFLYASSESQKQVFVELGLPYRAISYAEFEAVKDKLVQVARLIGQTVPSGAIYYKVPWEEVPELVAGRRIFLHKGYAYIAMYQVVSLAATQFRSYLSKALSLTNRKWTSTIREQEKDRLTPIVEALCTSYLGPDYSQPREYGDISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWKAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKIISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMDDIMDKVRNRHYQLACTLTFESIHGSSCDAGINHPNQYFIDSQKVLQSKNNSTV 451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 2344671 2353127 + ClG42_06g0021000.10 Clacu06g0210 250858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0210 451 FunFam DNA primase large subunit 5 244 - -
Clacu06g0210 451 Gene3D - 5 244 - -
Clacu06g0210 451 PANTHER DNA PRIMASE LARGE SUBUNIT 15 448 IPR007238 GO:0005658(PANTHER)|GO:0006269(PANTHER)|GO:0006269(InterPro)|GO:0006270(PANTHER)
Clacu06g0210 451 CDD PriL_PriS_Eukaryotic 22 439 IPR016558 -
Clacu06g0210 451 PIRSF DNA_primase_large 3 451 IPR016558 -
Clacu06g0210 451 Pfam Eukaryotic and archaeal DNA primase, large subunit 171 436 IPR007238 GO:0006269(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0210 K02685 - csv:101217274 833.943