Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu06g0351 | ATGGCTTCTCTTCATAGAAAGCAAGCTAACCATGCTTGCTTTCTCCTCCCCTTCCTCTTCTTTTCACTGCCATCTCTCTCCGTCTCCATCTCTGAAGCCGAAGCTTCGTATCTCACTCGTCGTCAACTTTTGGCTCTAAAAGAACACGATCAACTCCCAGATGATTACAAATACCAACTTGACATTCCTGACACTTTTCCAAATGAAAGGTTGAAGAAGGCTTACGTAGCCCTTCAAGCTTGGAAATTGGCCATTTATTCTGACCCTCAGAACATGACAGCCAATTGGGTTGGCGCCGATGTCTGTTCTTACACCGGCATCTACTGTACTACGGCGCTTGACAACTCAGACATGGAGGTTGTGGCTGGCATTGATTTGAACCATGGTGACATTGCAGGGTATTTGCCGCCAGAAATTGGCCTCATCACCGATTTGGCTCTCTTCCATATTAACTCTAACAGGTTCTGTGGGATCATTCCTTCCAGCTTCTCCAAGCTTGTTCTCATGTTCGAGTTTGATGTCAGCAACAACCGTTTCGTCGGCCATTTTCCTCACGTCGTCCTTGAATGGCCCACCGCTAAGTTCCTCGATCTCAGATATAATGACTTCGAAGGAGAAATCCCCTCCACACTCTTCACCAAGGAGTTCGATGCCATTTTCTTAAACAACAACAGATTCACCTCTCTAATTCCAGATACCATCGGAAACTCAACCGTCTCCGTTGTTTCCTTTGCCAACAATGAGTTCCATGGCTGCATTCCCAGCACCATTGGCCAAATGTCCAACCTCAACCAAATTCTCTTCATTGGCAACAAGCTTGGCGGCTGTTTCCCACCCGAGATCGGAAACCTCGTCAATCTTACGGTCTTCGATGCGAGCGCCAATGGCTTTATCGGCCAGCTGCCCGAAACCTTATCGGGCCTCCAAAATTTGGAGATTATGGACGTTAGCAACAATGAATTGAGGGGCTCTGTTCCTGGAGGCTTTTGCAAGTTGCCCAAATTAGCTAACTTCACTTTCTCGTTTAATTATTTTGATGGCAAAGATGCAGCGTGTGTTGGAACTAAGGGATCAGAGAAACTCTTTGATGATGCTCAAAATTGTTTGGCCAATCAACCGGAGCAGAAAGATGCAAACAAATGTAGCGTTGTCCTGAAGAAATCAGTGGACTGTGGAAACTGTGGTGGTGGTTCAAGTTCTCCCGAAGTGCCAATGACTCCTGAAGATCCATTTGATCAATCTCCATCGCCGAGATATAGGTCTCCACCACCTCCAGTGACCTCTCCACCTAAATCGATCGACACCTCGGTCCCAGAAGTGGGGACTCCTCCTTCTCCAAGTGAGACTTCTATTACATCATCACCACCGTCTCCAATTGAGTATTCACCACCAACCTCTGCACCACAATTGTCACCAACCTCTGCTCCATCATTATCACCAACCTCTGCTCCGATCTCACCACCTACCCTTGAAACCCCCAGTCCATCCCCAGCTGAATCTCCCGAACCACCAATTCATTCACCACCACCCCCAGTCCATTCCCCGCCACCATCGGTCTATTCTCCTCCACCACCGGTTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCATTCTCCTCCACCACCAATTCATTCCCCACCACCTCCTGTCCACTCTCCTCCACCACCGGTCCATTCTCCACCACCTCCTGTCCACTCTCCTCCACCACCAGTCCACTCCCCACCACCTCCTATTCACTCCCCACCACCACCTGTCTCCTCTCCTCCACCACCAGTTCATTCCCCACCTCCTCCTGTCCACTCTCCACCACCACCTATCCACTCCCCACCACCCCCGGTCCACTCACCACCACCACCCGTCCACTCACCCCCACCCCCCGTCCACTCACCACCCCCACCAGTTTACTCCCCACCCCCACCAGTTCATTCTCCACCCCCACCGGTTCACTCCCCACCCCCACCAGTCCATTCTCCACCACCGCCTGTTTACTCCCCACCGCCACCAGTCCAATCTCCACCACCTCCAACTGCATCTCCACCTCCTCCTCCTCCCGATTCTTCTCCACCGCCATCATTCGAGGACGTCATCCTCCCGCCAAATATCGGCTTTCAATATGCATCACCACCTCCACCACAGTTTCCTGGCTATTGA | 2163 | 51.32 | MASLHRKQANHACFLLPFLFFSLPSLSVSISEAEASYLTRRQLLALKEHDQLPDDYKYQLDIPDTFPNERLKKAYVALQAWKLAIYSDPQNMTANWVGADVCSYTGIYCTTALDNSDMEVVAGIDLNHGDIAGYLPPEIGLITDLALFHINSNRFCGIIPSSFSKLVLMFEFDVSNNRFVGHFPHVVLEWPTAKFLDLRYNDFEGEIPSTLFTKEFDAIFLNNNRFTSLIPDTIGNSTVSVVSFANNEFHGCIPSTIGQMSNLNQILFIGNKLGGCFPPEIGNLVNLTVFDASANGFIGQLPETLSGLQNLEIMDVSNNELRGSVPGGFCKLPKLANFTFSFNYFDGKDAACVGTKGSEKLFDDAQNCLANQPEQKDANKCSVVLKKSVDCGNCGGGSSSPEVPMTPEDPFDQSPSPRYRSPPPPVTSPPKSIDTSVPEVGTPPSPSETSITSSPPSPIEYSPPTSAPQLSPTSAPSLSPTSAPISPPTLETPSPSPAESPEPPIHSPPPPVHSPPPSVYSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVSSPPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVHSPPPPVHSPPPPVHSPPPPVYSPPPPVQSPPPPTASPPPPPPDSSPPPSFEDVILPPNIGFQYASPPPPQFPGY | 720 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4235954 | 4238116 | + | ClG42_06g0035100.10 | Clacu06g0351 | 250999 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu06g0351 | 720 | MobiDBLite | consensus disorder prediction | 408 | 431 | - | - | |
Clacu06g0351 | 720 | SUPERFAMILY | L domain-like | 83 | 348 | - | - | |
Clacu06g0351 | 720 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 237 | 326 | - | - | |
Clacu06g0351 | 720 | Gene3D | Ribonuclease Inhibitor | 237 | 353 | IPR032675 | - | |
Clacu06g0351 | 720 | Pfam | Leucine Rich Repeat | 310 | 332 | IPR001611 | GO:0005515(InterPro) | |
Clacu06g0351 | 720 | Pfam | Leucine rich repeat N-terminal domain | 77 | 110 | IPR013210 | - | |
Clacu06g0351 | 720 | Gene3D | Ribonuclease Inhibitor | 72 | 236 | IPR032675 | - | |
Clacu06g0351 | 720 | MobiDBLite | consensus disorder prediction | 396 | 720 | - | - | |
Clacu06g0351 | 720 | MobiDBLite | consensus disorder prediction | 432 | 456 | - | - | |
Clacu06g0351 | 720 | FunFam | Leucine-rich repeat extensin-like protein 1 | 75 | 236 | - | - | |
Clacu06g0351 | 720 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 14 | 717 | IPR051582 | - | |
Clacu06g0351 | 720 | MobiDBLite | consensus disorder prediction | 481 | 699 | - | - | |
Clacu06g0351 | 720 | PRINTS | Pistil-specific extensin-like signature | 484 | 507 | IPR003882 | - | |
Clacu06g0351 | 720 | PRINTS | Pistil-specific extensin-like signature | 519 | 537 | IPR003882 | - | |
Clacu06g0351 | 720 | MobiDBLite | consensus disorder prediction | 466 | 480 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu06g0346 | Clacu-Chr6:4213982 | Clacu06g0351 | Clacu-Chr6:4235954 | 6.20E-08 | dispersed | |
Clacu06g0347 | Clacu-Chr6:4221529 | Clacu06g0351 | Clacu-Chr6:4235954 | 6.00E-09 | dispersed | |
Clacu06g0348 | Clacu-Chr6:4225500 | Clacu06g0351 | Clacu-Chr6:4235954 | 2.50E-32 | dispersed | |
Clacu06g0351 | Clacu-Chr6:4235954 | Clacu06g1101 | Clacu-Chr6:20726194 | 6.20E-40 | dispersed | |
Clacu06g0349 | Clacu-Chr6:4226119 | Clacu06g0351 | Clacu-Chr6:4235954 | 4.80E-18 | proximal | |
Clacu06g0351 | Clacu-Chr6:4235954 | Clacu06g0352 | Clacu-Chr6:4239621 | 7.30E-09 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu06g0351 | - | - | - | 0.0 |