Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0361 ATGTCTAAAGAAGAAGATCCAAAAGCTAACAGAAGGACAACCCGGTCCTCTTCAGCAGCTGTTCTAAGGGATTCTGGTGAAATAAAGAAGAAATGTGATCCACATATTCCAACTCTTAATGATCTTGTTTTCGGAGAAGATACCATTAGTAAGGAAGATCTCCTGTCTAGTTTTCCTGGACGTCATACTCAAATTCTTGAACTCCTTAACCTTTTAGGTCCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACGTCGGCAGGAAAAACCAGTGTCATTCTACAAATATTTCGTCATCTCAACCGTCCTTTTGTCTACTCAAGCTGTCGTACTTGTTATAGTTTGCGAACTCTGTTTGAGTGTATCTTGAATCAGTTATTACTTCATCAGAAAGATGCAGATAATGGATATTTGAGTGCAAAACGCTGTGAAAAACCATCAGACTTTGTTAACTTTCTTCGTGAAGCCTTAGTTAAAGTTGTGAAAACTCTCCAGGGGAACCCAGGAAAGTTAGGCACCAAGAAGTTGACAGGACAAGAGCATGGGCATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCATATTGCCTTTTCTATTTAATCTCCATGAAGTTTTAAACATGAATGAGGTTGGATTTCTCTTCATCAGTAATACTTCTCCAGACGCATACTATTCAAATATGGGTTACTTGGAGCCCATCCCTGTTTATTTCTCTGAGTACACAGAAGATGATCTTCGTAAAATTTTTATGAGGAATCAAGCCAATCAAGAGATGTATTCTTCCTTTCTGAGTGTTGTATTGGGGCCATTCTATAGAATTACTAGACAAGTGAATGAGTTATCCTTAACGCTTTCATCATTGTACAAAACATACTGTGAAGCTTCAGATGATCTGAACAATGTTCCCAACGAGTCCAGCAAGAGGACACGTTTCAGTCATTTTCAGCCACATATTGCCCCTGCTTTGAATCAGATATTTAAAATTTCATCTCCACTTTCCGAGGTTAATAATTTGAAGGAAGCAAAGAGAAAAGGTGGTAGTATGAAGTTTAGCGGGTGTGACTCTTCTGAGCACTTGGATTTTCACATGTCTACTTCAGCAAAATATCTTCTTCTTTCAGCCTTCCTTGCTTCAAGAAACCCAGCTACACTTGATGCATCACTGTTTGATTCAACTGGGGGCACTAGTAGTCGAAAAAAGAGGAAGAGGCCATCTGAAAAATCAATTGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAATCTCCCTTGAAGACGAGCAAGGAAATGTTTTAATGGAAAGTCAAAATGAGGATAGTGAACTCATGTCTGATGTTCTCCTGCAACTTTCCAGCCTCTGCAATGCAAACTTTGTGGTTAAAGGAGGAAGTTGCCCACTAGAAGGTTCAACTCGATATCGCTCTACAGTGTCTGAAGATATGGCTTTGAAGGTGGCAAGGAGTATTAAGTTCCCCCTGTCCAAGTGCCAAGAGCATGTAGCATCAACGACTTATTTGCTGGACTCGATAGCACAGCAGTGGCTCAATGATGAGCTTGAGAGAAGAAATGGACTGGATCTAATACACGAAGAAGAGAAATACAGAAAATTATTGATGATGGTTAGTTACCAGCTATTGCTGTATGGCTTCAAAAACAGCAGAGATAAGAAAAGGAAAACTGTGGATTATTTTAGCAATGTCTTAGGTCACCTAATCTATTCCTTTGGCTCTCAAAACCGTCGGCAGTAG 1857 40.06 MSKEEDPKANRRTTRSSSAAVLRDSGEIKKKCDPHIPTLNDLVFGEDTISKEDLLSSFPGRHTQILELLNLLGPLNSPMLPLFVYGGTSAGKTSVILQIFRHLNRPFVYSSCRTCYSLRTLFECILNQLLLHQKDADNGYLSAKRCEKPSDFVNFLREALVKVVKTLQGNPGKLGTKKLTGQEHGHMIYLIFDNLELVRDWDKSSSILPFLFNLHEVLNMNEVGFLFISNTSPDAYYSNMGYLEPIPVYFSEYTEDDLRKIFMRNQANQEMYSSFLSVVLGPFYRITRQVNELSLTLSSLYKTYCEASDDLNNVPNESSKRTRFSHFQPHIAPALNQIFKISSPLSEVNNLKEAKRKGGSMKFSGCDSSEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGTSSRKKRKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAEISLEDEQGNVLMESQNEDSELMSDVLLQLSSLCNANFVVKGGSCPLEGSTRYRSTVSEDMALKVARSIKFPLSKCQEHVASTTYLLDSIAQQWLNDELERRNGLDLIHEEEKYRKLLMMVSYQLLLYGFKNSRDKKRKTVDYFSNVLGHLIYSFGSQNRRQ 618
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 4322832 4330306 + ClG42_06g0036100.10 Clacu06g0361 251009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0361 618 MobiDBLite consensus disorder prediction 1 21 - -
Clacu06g0361 618 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 50 531 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
Clacu06g0361 618 MobiDBLite consensus disorder prediction 400 424 - -
Clacu06g0361 618 Pfam AAA ATPase domain 58 217 IPR041664 -
Clacu06g0361 618 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 376 531 IPR047088 -
Clacu06g0361 618 Gene3D - 58 237 IPR027417 -
Clacu06g0361 618 MobiDBLite consensus disorder prediction 408 424 - -
Clacu06g0361 618 FunFam Origin of replication complex subunit 5 58 239 - -
Clacu06g0361 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 266 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0361 K02607 - csv:101223023 946.421