Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0444 ATGGCATTTTGGTGGACTCTGCTTGTTCTTGGATTTGCTTACGCGATCTGTAGGTTACTTTTGATGCTTATCCCTCCGAATGTGCCTTCAATCGAAGTTGACGCATCTGACGTTATGGACGACGGGAATCAGACGCAGGAGAATAGCTACATCTACATTCCACCTAGGGTAAAGACACAACAGCAAGACAAGAGAGTCCAGTGTTACGAGCCTGCAACTATGAAATACCTGGGCTATTTTCCTGCATTGTCACGAGATGAGGTCAAGGAGCGTGTTGCTTCAGCCAGGAAAGCGCAGAAAGAATGGGCCAAAAGTAGCTTCAAGCAAAGGCGTTTGCTTTTACGGATACTTTTGAAGTACATTATTGAACATCAAGAGCTCATTTGCGAGATCTCCTCCCGTGAAACTGGAAAAACAATAGTGGATGCTAATATGGGAGAAGTAATGGCGACATGTGAAAAGATTACTTGGCTTCTTTCAGAGGGTGAGAAATGGCTGAAGCCTGAGAGCCGATCATGTGGAAGGGCAACACTTCACAAGAAAGCCCGAGTAGAATTTCATCCCCTTGGAGTTATTGGGGCGATAGTCCCATGGAACTATCCATTCCATAACATTTTCAATCCAGTGCTTGCAGCAGTCTTTGCAGGAAACGGCATTGTAGTTAAGGTTTCAGAACATGCAAGTTGGTCAGGATGCTTTTATATCAGGATTATCCAAGCTGCACTTGCTGCTGTTGGAGCTCCCGAGAGTTTGGTTGATGTGATAACAGGGTTTGCTGAAACAGGTGAAGCGCTAGTGTCTTCAGTAGACAAAATGATATTCGTTGGATCTACTGGTGTGGGTAGGATGATAATGAAAACTGCTGCTGAGACACTTATTCCAGTTACTCTTGAGTTGGGTGGAAAGGACGCATTTATCGTGTGTGAGGATGTAGATCTGGATCATGTGGTAAACGTTGCTCTCAGGGCTTCTATTACATCAAGTGGACATAATTGTACTGGAGCTGAGAGATTTTATGTCCACAAGAACATTTATTCTTCGTTTGTGGATAAAATATCAGAACGTGTAAAGGCTATTACAGTTGGTCCACCGTTAGCTGGGAAATATGATATGGGTGCCATCTGTACGCAAGAGCAGTCTGAGAAACTTCAAAGCCTTGTAAATGATGCCTTAGACAGAGGGGCTAAAATTGTTGCTCGTGGAACTTTTGGACATTTACCTGAAGGTGCCGTTGATCAATATTTCCCGCCTACCGTTATTGTTGATGTCAACCATACAATGAAGTTAATGCAAGAGGAGGCATTTGGACCAATCCTGCCTATAATGAAATTCACCACAGATGATGAGGCCGTGAATCTTGCAAATGATTCAAGGTTTGGGCTTGGTTGTGCTGTCTTCTCTGGCAGTCAGCGGCGTGCCAAGAACATTGCTTCGCAGATACGTACTGGAAGTGTTGCAATTAATGACTTTGCCACAAATTATTTGTGCCAGTCCTTGCCATTTGGTGGTGTAAAAGAGAGTGGATTCGGTCGATTTGCGGGCGTTGAAGGATTACGAGCTTGTTGTCTTGTTAAAGCAGTTGTTGAGGATAGGTGGTGGCCATACATTCAGACCAAGCATCCGAAGCCTCTTACGTATCCTGTTGCAGACAACGCCTTTGAGTTTCAGATGTCACTTGTCGAAGCAACGTATGGGCTGAACATATGGGATCGATTAAGAGCATTGGTCAATGTTCTGAAGATGCTGTCCGAGCAGAACACTCCGTCCAAAGACAACTCTACCATTGATGATGAAAGTAAGAGAGCTGATTGA 1812 44.32 MAFWWTLLVLGFAYAICRLLLMLIPPNVPSIEVDASDVMDDGNQTQENSYIYIPPRVKTQQQDKRVQCYEPATMKYLGYFPALSRDEVKERVASARKAQKEWAKSSFKQRRLLLRILLKYIIEHQELICEISSRETGKTIVDANMGEVMATCEKITWLLSEGEKWLKPESRSCGRATLHKKARVEFHPLGVIGAIVPWNYPFHNIFNPVLAAVFAGNGIVVKVSEHASWSGCFYIRIIQAALAAVGAPESLVDVITGFAETGEALVSSVDKMIFVGSTGVGRMIMKTAAETLIPVTLELGGKDAFIVCEDVDLDHVVNVALRASITSSGHNCTGAERFYVHKNIYSSFVDKISERVKAITVGPPLAGKYDMGAICTQEQSEKLQSLVNDALDRGAKIVARGTFGHLPEGAVDQYFPPTVIVDVNHTMKLMQEEAFGPILPIMKFTTDDEAVNLANDSRFGLGCAVFSGSQRRAKNIASQIRTGSVAINDFATNYLCQSLPFGGVKESGFGRFAGVEGLRACCLVKAVVEDRWWPYIQTKHPKPLTYPVADNAFEFQMSLVEATYGLNIWDRLRALVNVLKMLSEQNTPSKDNSTIDDESKRAD 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 5229152 5237777 + ClG42_06g0044400.10 Clacu06g0444 251092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0444 603 FunFam aldehyde dehydrogenase 22A1 65 317 - -
Clacu06g0444 603 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 55 528 - -
Clacu06g0444 603 SUPERFAMILY ALDH-like 50 529 IPR016161 GO:0016491(InterPro)
Clacu06g0444 603 Pfam Aldehyde dehydrogenase family 61 527 IPR015590 GO:0016491(InterPro)
Clacu06g0444 603 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 297 304 IPR029510 GO:0016491(InterPro)
Clacu06g0444 603 CDD ALDH_F15-22 69 531 - -
Clacu06g0444 603 FunFam Aldehyde dehydrogenase A 301 495 - -
Clacu06g0444 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 305 500 IPR016163 GO:0016620(InterPro)
Clacu06g0444 603 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 65 525 IPR016162 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1749 Clacu-Chr2:31024972 Clacu06g0444 Clacu-Chr6:5229152 6.90E-46 dispersed
Clacu06g0444 Clacu-Chr6:5229152 Clacu06g1775 Clacu-Chr6:28284469 3.60E-57 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0444 - - - 0.0