Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0577 TCGGATTCTGAATCGATCAAATTCCACAAGAAACTCGTAAATTTTCCTGGGGTAGGAAAAGAACGAACTCATAGAACTTGGATTCTTCGGTTTTCTACTATGGAAATGGATCGTGATGATTTGAGCGTTCGATTATCTGCTCTATGGAACATCATTGGTCTAAAGAGAAGCCTTAAAGAGGACAGAATTCCTTGCCAAATTGAAGAGGGTCTGTTCTTAGGCTCTGTTGGAGCTGCCCATAACAAAGATCAATTGAAGAAATTGAATATCACTCACATCTTAACCATTGCTTGTTCTTTGCCACCTGCTGATCCAAATGATTTTGTATGTAAAGTAGTTGGTGTCTTGGACACTAGAGATGCAGATATTAAACAACACTTTGATGATTGTTTCAATTTTATCGATGAGGGAAGACAATCTGGTGGAGGGGTCTTGATTCATTGCTTTGCTGGAATATCCAGAAGTGTAACCATTACAGTTGCCTATCTGATGAAAAAGCGTGGTATGAATCTAACTCAAGCATTGGAACACGTCAAGAGTAGACGACCGCAGGCAGCTCCAAATGTTGGTTTCATGGTTCAACTCAAGGACTTTGAAACAGCCCTTCAAGATGATCAGATGAAACTGTCAAATGTTTTGAGTTCTAAGCAGCTGCTGGTAACCTCCTTTAACAACAGAATCAGGGGGAGAAAGAGTGGACAATCAGACAACAATGGATAA 720 40.14 SDSESIKFHKKLVNFPGVGKERTHRTWILRFSTMEMDRDDLSVRLSALWNIIGLKRSLKEDRIPCQIEEGLFLGSVGAAHNKDQLKKLNITHILTIACSLPPADPNDFVCKVVGVLDTRDADIKQHFDDCFNFIDEGRQSGGGVLIHCFAGISRSVTITVAYLMKKRGMNLTQALEHVKSRRPQAAPNVGFMVQLKDFETALQDDQMKLSNVLSSKQLLVTSFNNRIRGRKSGQSDNNG 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 6557751 6561723 - ClG42_06g0057700.10 Clacu06g0577 251225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0577 239 SMART dsp_5 63 201 IPR020422 GO:0006470(InterPro)
Clacu06g0577 239 FunFam Dual specificity phosphatase 12 65 218 - -
Clacu06g0577 239 CDD DSP 64 197 - -
Clacu06g0577 239 Pfam Dual specificity phosphatase, catalytic domain 71 200 IPR000340 GO:0016311(InterPro)
Clacu06g0577 239 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 64 203 IPR029021 -
Clacu06g0577 239 Gene3D Protein tyrosine phosphatase superfamily 57 211 IPR029021 -
Clacu06g0577 239 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 62 206 - GO:0004721(PANTHER)|GO:0008330(PANTHER)|GO:0017017(PANTHER)|GO:0033550(PANTHER)|GO:0043409(PANTHER)
Clacu06g0577 239 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 125 183 IPR000387 GO:0016311(InterPro)
Clacu06g0577 239 ProSiteProfiles Dual specificity protein phosphatase domain profile. 63 204 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g0577 Clacu-Chr6:6557751 Clacu10g1356 Clacu-Chr10:26624471 3.30E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0577 - - - 0.0