Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0734 ATGGCCGGTGAGGTAGCGGTGGAGGGTGCTGTGGCGGCAGCCGCGGTGGCGACAGAACTAGCCGATTCCAGTCAGCAGTCCCATAAATTGGAGAGAAAATGGACCTTTTGGTTTGATAACCAGTCTAGGCCGAAGCAAGGTGCTGCTTGGGGCACTTCTCTGCGCAAGGTCTATACCTTTGACACCGTCGAAGAATTCTGGTGTTTGTACGATCAGTTATTCAAGCCGAGCAAGTTGCCGGCTAATGCAGATTTTCACCTGTTCAAATCTGGAGTTGAACCGAAATGGGAAGATCCTGAGTGCGCTAATGGAGGAAAATGGACTGTCACGAGCAGTAGAAAGGCTAACCTCGATAACATGTGGTTGGAAACGTTGATGGCTTTGATTGGGGAACAATTTGAGGAGTCTGATGAGATCTGTGGCGTAGTTGCCAGTGTGCGTCAGAGGCAGGACAAACTTGCCCTGTGGACCAAGACAGCAACAAATGAGGCTGCTCAGATGAGCATTGGTAGAAAATGGAAGGAGATTATTGACGTGACCGACAAGATTTCCTTCAGCTTTCATGAGGACTTGAGAAGGGAGAAGTCAGCAAAAGCTCGATACAGTGTTTGA 612 49.18 MAGEVAVEGAVAAAAVATELADSSQQSHKLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQLFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVTSSRKANLDNMWLETLMALIGEQFEESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKISFSFHEDLRREKSAKARYSV 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 8618825 8621080 - ClG42_06g0073400.10 Clacu06g0734 251382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0734 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 21 195 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
Clacu06g0734 203 FunFam Eukaryotic translation initiation factor 4E 19 203 - -
Clacu06g0734 203 Pfam Eukaryotic initiation factor 4E 29 185 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Clacu06g0734 203 ProSitePatterns Eukaryotic initiation factor 4E signature. 84 107 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Clacu06g0734 203 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 203 IPR023398 -
Clacu06g0734 203 SUPERFAMILY eIF4e-like 21 196 IPR023398 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g0734 Clacu-Chr6:8618825 Clacu10g1337 Clacu-Chr10:26369838 4.20E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0734 K03259 - csv:101208495 386.726