Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0801 ATGGGTGGCGACGGAAAGCTCTTTACATTGGCTGAAGTCTCTCAGCACAATAACCGCAAAGACTGTTGGTTGATCATTAATGCCAAGGTTTACAATGTAACCGAGTTCTTGGAAGACCATCCCGGTGGCGACGAGGTGTTGTTGTCTGGCACAGGTAAGGATGCAACTGATGATTTTGAAGATGTGGGTCATAGTGAGAGTGCAAGAGAAATGATGAGCAAATACTACATTGGAGAGATGGACGTGTCGACGATCGCAGGACGGTCGGCATACACAACTCCAAAGCAGCCTCATTACAATGAGGATAAGACGACCGAGTTCATCATCAAGCTCCTCCAGTTCTTGGTTCCTCTCGCAATCTTGGGTTTGGCAGTGGGTATCCGCTTTTACACCAAATCAACCTGA 405 47.41 MGGDGKLFTLAEVSQHNNRKDCWLIINAKVYNVTEFLEDHPGGDEVLLSGTGKDATDDFEDVGHSESAREMMSKYYIGEMDVSTIAGRSAYTTPKQPHYNEDKTTEFIIKLLQFLVPLAILGLAVGIRFYTKST 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 9626866 9630483 - ClG42_06g0080100.10 Clacu06g0801 251449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0801 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Clacu06g0801 134 PANTHER CYTOCHROME B5 6 127 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Clacu06g0801 134 FunFam Cytochrome b5 type B 3 85 - -
Clacu06g0801 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Clacu06g0801 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 84 IPR036400 -
Clacu06g0801 134 Gene3D - 3 84 IPR036400 -
Clacu06g0801 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Clacu06g0801 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Clacu06g0801 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Clacu06g0801 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Clacu06g0801 134 SMART Cyt_b5_2 8 81 IPR001199 -
Clacu06g0801 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g0277 Clacu-Chr6:3350116 Clacu06g0801 Clacu-Chr6:9626866 1.90E-27 dispersed
Clacu06g0331 Clacu-Chr6:4032570 Clacu06g0801 Clacu-Chr6:9626866 1.50E-08 dispersed
Clacu06g0801 Clacu-Chr6:9626866 Clacu08g1204 Clacu-Chr8:21965189 1.80E-25 dispersed
Clacu05g0379 Clacu-Chr5:3246844 Clacu06g0801 Clacu-Chr6:9626866 7.90E-58 wgd
Clacu06g0801 Clacu-Chr6:9626866 Clacu07g0185 Clacu-Chr7:2289883 3.00E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0801 K23490 - csv:101213506 247.284