Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0878 ATGGCGTCAACCGAAATCATTCCCATTATCCAACATCCTTTTTCTTCTTCTTCTCCCACCATCTCTGCTACTGTAGACACAATGTTAATCAAAGAATATGGTAATAAGGATGGAAATCAACATCCCTTTTTTCTCCAGCTCACAAGTCAAGCCACCGCCGCCGCCAATTTCAAACGGCAAAGACGGCGGCGAGTTTCCCGAGAAAGTATATTGCCCGGCCACAATGTTGGGCATGCTGTGGCCGTCACATTTCTTGCGGTGCGTTTATGTTTCAGAGTTCTGCGATGCCTTTGGATAGTCTCCAAATGGATAGCAAGATTTCTATCCCTTGGATGTTATGTTGCTTTTATTTTCCCTGGTCTACTTCAAGTTGCATATTATTATCTGCACTGTGGCCAGATTCGAAGAAGCATAAAGTATGGCGATCAGCCAAGAAATAGGTTGGATATATATCTACCAAAAACTGGGCATGGGCAGAGGCCAAAGCCTGTGGTTGCATTTGTAACTGGTGGAGCTTGGATTATGGGTTATAAAGCATGGGGTTCTCTTCTTGGGTCACAGTTATCAGAGAGAGACATAATAGTAGCCTGCCTTGATTACAGAAATTTCCCCCAAGGAACCATGAGTGATATGATAGAGGATGTTTCTCAAGGCATCTCATTTGTATTCAATAATATTGCTGAGTATGGAGGCGATCCTAACAGGATTTATCTAATGGGACAGTCAGCCGGTGCACATATCGCGGCTTGCACACTCGTAGAGCAGGCAATCAAAGAAGCTGGTGGTGAGAGAGTTTCTTGGAGTGTCTCCAGGATAAAAGCTTACTTTGGTTTGTCAGGGGGGTACAATTTGGTAAATCTGAAGGACTACTTTCATGGTCGAGGTCTTCACAGATCCATCTTTTTAAGCATAATGGAAGGAGAAGAGTCCCTGCAAAGATTTTCTCCCGAGGTTATTGTACAGGATCCAAAGATTAAAGATGCAGTTTCCCTGCTTCCACACTTGACTCTATTTCATGGAACTGCAGATTATTCCATACCATCAGATGCCAGTAAGAGCTTTGCAGAGGTGCTTGAAAGACTTGGAGTAAAAGTTGAAACAGTTCTTTACAAAGGAAAGACGCATACAGATTTGTTTGTCCAGGATCCAATGAGAGGTGGTAAAGATCAGTTGGTTGAAGATTTGATTTTCATCATTCATGAAAATGATAGGGATGCTCTTGCCACAGATGCAGTGGCTCGCCGAAGGAGGCGCCTTGTACCGGAGTTATTGTTGAAGTTAGCACGTAATGTTAGCCCATTCTGA 1305 43.45 MASTEIIPIIQHPFSSSSPTISATVDTMLIKEYGNKDGNQHPFFLQLTSQATAAANFKRQRRRRVSRESILPGHNVGHAVAVTFLAVRLCFRVLRCLWIVSKWIARFLSLGCYVAFIFPGLLQVAYYYLHCGQIRRSIKYGDQPRNRLDIYLPKTGHGQRPKPVVAFVTGGAWIMGYKAWGSLLGSQLSERDIIVACLDYRNFPQGTMSDMIEDVSQGISFVFNNIAEYGGDPNRIYLMGQSAGAHIAACTLVEQAIKEAGGERVSWSVSRIKAYFGLSGGYNLVNLKDYFHGRGLHRSIFLSIMEGEESLQRFSPEVIVQDPKIKDAVSLLPHLTLFHGTADYSIPSDASKSFAEVLERLGVKVETVLYKGKTHTDLFVQDPMRGGKDQLVEDLIFIIHENDRDALATDAVARRRRRLVPELLLKLARNVSPF 434
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 11214824 11221097 + ClG42_06g0087800.10 Clacu06g0878 251526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0878 434 SUPERFAMILY alpha/beta-Hydrolases 130 395 IPR029058 -
Clacu06g0878 434 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 23 394 IPR050300 GO:0016298(PANTHER)
Clacu06g0878 434 Gene3D alpha/beta hydrolase 130 384 IPR029058 -
Clacu06g0878 434 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 130 383 - -
Clacu06g0878 434 Pfam BD-FAE 148 358 IPR049492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2511 Clacu-Chr5:33204319 Clacu06g0878 Clacu-Chr6:11214824 3.30E-146 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0878 K15889 - csv:101213470 659.448