Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0922 AGATCCCAAGTTACCTCACTATTTGGAGCAGACTCTCTTTGGGCAAAAGGGTATACGGGTTCCAAAGTCAAGATGGCTATATTCGATACTGGCATTCGTGCTAATCACCCACATTTTAGGAATATCAAGGAGCGAACAAATTGGACCAATGAAGATACTTTAAATGATAATCTTGGACATGGGACATTTGTTGCTGGTGTCATTGCAGGTGGAGATGAAGAATGTCTAGGCTTTGCTCCAGATACGGAGATATATGCTTTTCGTGTCTTTACAGATGCACAGGTGTCATACACTTCATGGTTCCTTGATGCATTCAACTATGCAATTGCTACCAACATGGATGTATTAAATTTAAGCATCGGTGGGCCAGATTACTTGGATCTTCCATTTGTGGAGAAGATTTGGGAAATAACAGCAAATAATATCATCATGGTTTCTGCAATTGGAAACGATGGACCACTTTATGGGACTTTAAACAATCCTGCAGATCAGAGTGACGTCATTGGCGTTGGTGGTATTGACTACAATGATCATATTGCTTCATTTTCCTCACGTGGCATGACTACTTGGGAGATGCCTCATGGTTATGGTCGTGTGAAGCCAGATGTTGTTGCATATGGTCGGGAAATTATGGGATCCAAAATTAGTACTGGGTGCAAAAGTTTATCAGGCACTAGTGTGGCGAGTCCTGTGGTTGCTGGTGTGGTATGTCTACTTGTTAGTATAATCCCTGAAAGCCAGCGGAAGGTTATTTTAAATCCAGCTAGCATGAAACAAGCACTTGTTGAGGGAGCTGCAAAGCTTGGTGGTCCTAATATGTATGAGCAAGGAGCTGGCAGAGTTGATCTGTTAGAATCGTATGAAATACTTAAGAGCTACCAACCCCGGGCGAGCATCTTCCCCGCTGTTCTTGACTATACAGATTGCCCTTATATGTGGCCCTTTTGTCGCCAACCTCTTTATGCAGGTGCAATGCCTACTATTTTCAATGCCACCATTTTGAATGGGATGGGTGTAATTGGCTATGTTGAAGGTCAACCCACTTGGCATCCTTTGGATGAAGAAGGAAATCTCTTGAGTATTCACTTCACTTATTCCAAGGTCATTTGGCCTTGGACTGGTTACATTGCACTTCATATGCAAATTAAGGAAGAAGGTGCACAATTTTCTGGAGAAATTGAGGGCAATGTGACTCTAACAGTATATAGTCCTCCATCGAGAGGAGAGAAGAACCGCCAGATTAGTACTTGTGTGTTACAGCTGAAGTTAAAAGTAGTTCCCACACCTCCAAGATCAAAACGAATTTTATGGGATCAGTTTCATAATATCAAATATCCTCCTGGTTATATTCCTAGAGATTCCTTGGATGTACGCAATGACATTCTGGACTGGCATGGAGACCACCTGCATACAAATTTTCATATCATGTTTAACATGTTAAGAGATGCTGGGTACTATGTTGAAACACTTGGTTCTCCTCTTACATGCTTTGATGCTCGCCAATATGGGACACTTCTACTAGTGGATCTTGAAGACGAGTACTTCAAAGAGGAAATTGAAAAGTTGAGGGACGATGTTATGATTACTGGATTGGGATTGGCTGTGTTTTCTGAATGGTATAATGTAGAAACAATGGTAAAGATGAGGTTTTTTGATGACAACACAAGAAGCTGGTGGACACCAGTTACTGGAGGTGCAAATATTCCTGCACTCAATGATCTTTTAGCCCCATTTGGTATTGCTTTTGGGGATAAGATTTTGAATGGTGATTTTTCTATTGATGGTGAACAGAGTCGGTATGCGTCAGGAACAGATATTGTGAGGTTTCCACAAGGTGGTTATGTGCATAGTTTCCCCTTCGTTGATAGCTCAGAGAGTGGGGCGGCTCAGAGCATACTAACATCTAGCATGAGTAAGGCAGACTTTCCGATTCTTGGCCTATTAGAGGCAGGAGAAGGCCGCATTGCAGTCTATGGAGATTCAAATTGTCTGGATAGCAGTCATATGGTTACAAACTGCTATTGGCTGCTGAGAAAAATATTAGATTTTACCAGTGGAAATATTAGAGATCCAGTTCTATTCACTAAATTTTCGAAACAAAATTCACCTCTGTATCTAGAAGATAACAAACTACCATCTCGAAGAAGTGATGTAAACTTCTCTTTGTATTCTGCTGTTGCTGGAAAGGAATTGATATGCAGGAGTGATTCTAGGTTTGAAGTATGGGGAACCAAGGGATACAGTATACAGGTCAGGGGAAGAAATCGAAGGCTGCCTGGATTTCCCGTAATAGACTTGGGAAGAGGCTTGAATTCTACTCCTGAGAGTTCTTCGAGGGGACCTCCAAAGTTGATGTTAAAAAACCGAAGAGATACATATGGAAACCGATACTTAAGTTTGTTCTACCGAGATGAGCCTGACATGCCTTTGATTGTTCCTAATCATTGGCTTGTTCCTGCTGTAGTTGCATTAACAGGGCTTTTGCTCCTTTTGAGTTTTTGGCGGATTAGACAGAAGCGGCGACGACGACGCAGAGGATCTGGATCTGCACGTTTTTCGAATATATAG 2568 41.82 RSQVTSLFGADSLWAKGYTGSKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGGDEECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYNDHIASFSSRGMTTWEMPHGYGRVKPDVVAYGREIMGSKISTGCKSLSGTSVASPVVAGVVCLLVSIIPESQRKVILNPASMKQALVEGAAKLGGPNMYEQGAGRVDLLESYEILKSYQPRASIFPAVLDYTDCPYMWPFCRQPLYAGAMPTIFNATILNGMGVIGYVEGQPTWHPLDEEGNLLSIHFTYSKVIWPWTGYIALHMQIKEEGAQFSGEIEGNVTLTVYSPPSRGEKNRQISTCVLQLKLKVVPTPPRSKRILWDQFHNIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVETLGSPLTCFDARQYGTLLLVDLEDEYFKEEIEKLRDDVMITGLGLAVFSEWYNVETMVKMRFFDDNTRSWWTPVTGGANIPALNDLLAPFGIAFGDKILNGDFSIDGEQSRYASGTDIVRFPQGGYVHSFPFVDSSESGAAQSILTSSMSKADFPILGLLEAGEGRIAVYGDSNCLDSSHMVTNCYWLLRKILDFTSGNIRDPVLFTKFSKQNSPLYLEDNKLPSRRSDVNFSLYSAVAGKELICRSDSRFEVWGTKGYSIQVRGRNRRLPGFPVIDLGRGLNSTPESSSRGPPKLMLKNRRDTYGNRYLSLFYRDEPDMPLIVPNHWLVPAVVALTGLLLLLSFWRIRQKRRRRRRGSGSARFSNI 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 12334076 12339079 - ClG42_06g0092200.10 Clacu06g0922 251570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0922 855 SUPERFAMILY Subtilisin-like 7 285 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu06g0922 855 PRINTS Subtilisin serine protease family (S8) signature 20 39 IPR015500 -
Clacu06g0922 855 PRINTS Subtilisin serine protease family (S8) signature 56 69 IPR015500 -
Clacu06g0922 855 PRINTS Subtilisin serine protease family (S8) signature 223 239 IPR015500 -
Clacu06g0922 855 ProSiteProfiles Serine proteases, subtilase domain profile. 1 290 - -
Clacu06g0922 855 FunFam subtilisin-like protease SBT6.1 1 286 - -
Clacu06g0922 855 Pfam Subtilase family 20 272 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu06g0922 855 Gene3D Peptidase S8/S53 domain 2 288 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu06g0922 855 PANTHER PEPTIDASE S8 3 481 IPR050131 GO:0004252(PANTHER)|GO:0005794(PANTHER)
Clacu06g0922 855 CDD Peptidases_S8_SKI-1_like 14 270 IPR034185 -
Clacu06g0922 855 ProSitePatterns Serine proteases, subtilase family, histidine active site. 60 70 IPR022398 -
Clacu06g0922 855 ProSitePatterns Serine proteases, subtilase family, serine active site. 224 234 IPR023828 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0922 K08653 - csv:101222509 1674.06