Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g0994 ATGGAAGATTCCTCCAAATCAGCCGATGATCGGAAGACCCGTTTCTATCACCCCTACCAAGACCTACACGTTCCGATCACCAAGCTCTACGAACTCCCCACCTCTCCCGAGCATCTCTTCTTCGAAGAAGCCGCCAGGCCCCACCGTTCTTGGGGCGAAAACCTCCAGTACTACACCGGAATTGGCTACCTCTCCGGCGCCATTCTCGGCGGCGCCAGGGGCTCTGTCCAGGGCCTCAGGGCGGCCGAGCCCGGCGACTCTGTCAAACTCCGTGTCAATCGAGTTCTCAACGCTGGGGGCCAGCTTGGCCGGAGGGCTGGGAACTCTCTTGGGATCCTTGGCTTGATTTTTGCTGGTTTGGAAAGTGGGGTTATTCAATTGAGAGGTACTGATGATGTCTTGAACAGTATTGTCGCCGGATTGGGGACTGGTGCGCTTTATAAAGCGGCTTCCGGGCCAAGATCTGCCGCCATCGCCGGTGCCATTGGAGGGATTGCTGCTGCAGCTGCAGTTGGGGGAAAGCAGGCAGTTAAGAGATATGTGCCAATATAG 552 56.7 MEDSSKSADDRKTRFYHPYQDLHVPITKLYELPTSPEHLFFEEAARPHRSWGENLQYYTGIGYLSGAILGGARGSVQGLRAAEPGDSVKLRVNRVLNAGGQLGRRAGNSLGILGLIFAGLESGVIQLRGTDDVLNSIVAGLGTGALYKAASGPRSAAIAGAIGGIAAAAAVGGKQAVKRYVPI 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 14452400 14452951 + ClG42_06g0099400.10 Clacu06g0994 251642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g0994 183 PANTHER TIM23 32 170 IPR045238 GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER)
Clacu06g0994 183 Pfam Tim17/Tim22/Tim23/Pmp24 family 57 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g0994 Clacu-Chr6:14452400 Clacu09g0084 Clacu-Chr9:770392 1.70E-50 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g0994 K17794 - csv:116401801 315.464