Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g1702 ATGGCGCTGTTCAGAAGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGTTACAAAGCCACTTTCCTGATGCCTCATTCATGGTTTTCAACTTCAGAGAAGGTGGCAGGCGAAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTATTGCCATTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCACTGGAGGGTCAACAGAATGTGCTATTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCTGGTCTTCTTTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCTGATTGGCCTCCATCGGATACACCTCTAGTTTTGGATTGTTTAATACTAAGAGTTTTACCTCTTTTTGATGGGGGAAAAGGATGTAGGCCTGTTGTGCGTGTTTATGGTCAAGACCCCTCAGCACCGGCCAATAGAACTTCAAAGCTTTTATTTTCGACATCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTAGTTCTTGAATGCATCCATATGGATGAAGATCTAGTACACGAGGAGATGATGTTTAGAGTTATGTTTCACACAGCATTTGTTAGATCAAACATAATGATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCGAGGGAGCAGTATCCCAAGGACTTCAGAGTTGAGGCACTCTTTTTGGATGCTGATGCTGTTGTCCCCAGTCTCACCACATCCTTCGATGATGAAGATGGAAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTCGAAGAGATCTTCAGTAGTGTAATTGATGGCCAGGAAGCAAAGGGGTCCAGTGATCCTCAAGTAGTCAATCATATAAACCGTAAAGAAGATTGGAAGGAGGACTTCGATCCTCCTGCATTCCAGGATTGTGACGATGGAAATCTTAAGCATGATAAGAAATCAGATTTTGATGCAGTGAAGGACATTACTGTGGATGATGTGAAGTACAAACTGGATGAAAATATATATTCTGATCTTAATGCAGTTAAGGACATTGCTGTGGATGATGGGGATATGAATTCAAATTCCTTTTTGGTTGCTGCTAATGTCCCGACTCATGCGAAAATCCAGGGGTTGGTGGATGATGCATACGAGAAATGTGAAGGTATGGAAGAAAAGGATGATGGAAGAGATACTACACCTGAGAAATTGGAAAACAAGGTTCTGCAGAAAAAGTTGAGTGCTGATGGCTCTAGACAAAAATCAGAAAAATTGCAAACACCGATTCCCAAGAAACAGCCTATTTCAAGTGGAAAACCGACCGCTGATATGGGTTTAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTCTCTGCAAAACAAGCGAAGCCAAATGCAGTTTCTAGGTGGATCCCTCCTAACAAAGGCTCCTATATGAATTCTATGCATGTTTCCTATCCACCTTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCATCATCGAAGGATGTAAATGCAAATTCCAAAACGAAGGCTGCTGCCACTACAGATTCTCTGGTTGCTACAGATGTTTTTACTGAACGAAAAAACTATGAAGTGGATTCTGTGAGGCCTTCACACTCCGCCCCTGGGAACCTCATGCTTGGCCCATCATCTCCAGTTGAGTCAATTGAGGAGACATATTCTTCCTCTGAAACTTTAAAACCATCACATAGTGATGCACAACTTGGAGTACCACTTCCCCCCTTGCCCACAAAGCCTCCATCTCCATATTTACCATCACCCCGCCAGGCAAATGAAATACCTCCTCCACCTCCTCCACCTCCTCCACCACCCACTTCATTTCATCATATAGCTACAAGGTCCTCTGCTCTACCACTTTCCGCGTCTTTAGCACCACCATTCATAGTTAACTCACCAAAGGCAGTGAATACCCCTGCCCCTCCCCCTCCCCCTCCCCCTCCATCTAGTAGGCAGAATAGTGTTTTGCCCCATTCTTCAACACAACCATCATGGGAGCAAATATATTCTTCCGTTTCTACTGGAACAGTGACTGATTCTATACCTCCTCCACCCCCACCTTCCTCTGTGGGCATGCCATCTACATTAAAGAATATTGTAAGTACTTCTCCTGTACCTGTTTTGTCACCTTTTTCAGCCCTTCTTGCCTCATCACATAAAGGGATATCACTACCCCCACCCCCACCCCCACCTCCCCCTCCCCCTCCCCCTCCCCCTCCCCCACCTTCTATGAAACATGAAGCACCTGTTCCACCACCTCCTCCACCCCCGCCTCCACCGCCCCCACCCCCATTAGTGCATGGGGCATTTCCTTCACCATCTCTAATGAAAACAGCACCACCCCCACCACCTCCGCCCCCACCCTTGCATAGTGCATCTCCAGCACTATCTTTATTGCATGGAGCCCCACCTCCACCATCTCCACCACTTTCAAAGCAGAGAGCATCACCTCCGCCACCTCCTCCTCCGCCACCTTCCATATATGGAGCCCCACCTCCACCACTTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCACCACCTGCCGTGTACGGAGCCCCACCTCCGCCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCGCCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCGCCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCATCTCCGCCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCACCACCTCCTCCCCCACCACCTGCCGTGTACGGAGCCCCACCTCCACCACCTCCTCCTCCACCACCTGCCATGTACGGAGCCCCACCTCCACCACCTCCACCACCTCCTCCCCCACCACCTTCCATGTATGGAGTCTCGCCCCCACCACCTCCTCCCCCACCACCTTCCATGTATGGAGCCTCACCTCCACCACCTTCTATACATGGAGCCCCACCCCCACCTCCTCCCCCACCTTCGATGTTTGGTGCAACTCCTCCTTTGACCCCTACAATGTGGGGGGTACCCCCTCCTCCTCCACCCTCCTCTATGCGTGGGGCTCCTCCACCCCCTCCACCTCCACCAATGCGTGAGGCTCCTCCACTGCCACCCTCCTTGCGTGGGGCTCCCCCACCACCGCCACCTCCATCTATGCATGGGGCTCCTCCTCCACCACCACCACCTCCTCCAATGCATGGGGCTCCACCACCACCACCTCCTCCGATACGTGGGGCTCTTCCCCCACCACCTCCCCCTCCATTGCATGGGGCTCCTCCACCACCGCCCCCTCCAATGCATGGAGCCCCTCCCCCACCACCACCACCCGGGGGTGGTAGAGCCCCTCCCCCTCCTCCCCCGCCCGGGGGTGGTAGAGCCCCTCCCCCGCCCGGGGGTGGTAGAGCCCCTCCCCCGCCTCCCCCGCCTGGGGGTGGTGGAGCACCAACACCACCTCCCCCTCCTGGTGGAGGTCGTGGAGCACCTGCCCCTCCTAGACCTCCTGGTGTTGGACCTCCTCCACCTCCACCATTAGGTGCTAAAGGAGCAAATGCTCCACCTGACCCGAGAGGTTTGTCTTCTGGGAGAGGGCGTGGGCTAACACGCTCAACAGCTACAGCACCTCGAAGGTCCTCCTTGAAACCTCTACATTGGAGCAAAGTAACGAGGGCTCTGCAAGGGAGCTTGTGGGAAGAACTACAAAGATACGGCGAGCCTCAAATTGCTCCAGAGTTTGATGTGTCTGAGTTAGAGACTCTCTTTTCTGCAACTGTCCCCAAACCTGCTGATAAATCTGGAGGGCGAAGGAAGTCTGTTGGATCCAAAACTGACAAAGTTCACCTGATTGACCTCAGGAGAGCTAATAACACCGAAATTATGCTCACCAAAGTAAAGATGCCACTTCCTGATATGATGGCTGCAGTGCTAGCAATGGATGAGTCAGTTTTAGATGTTGATCAGGTGGAAAATCTCATAAAATTTTGTCCTACGAAGGAGGAGATGGAACTTCTTAAGGGATACACTGGTGATATGGATAACCTTGGAAAGTGTGAACAGTATTTTTTGGAGCTGATGAAAGTGCCTCGAGTAGAGTCAAAGATGAGAGTGTTTTCTTTTAAGATACAGTTCGGCTCTCAGATATCAGAATTTAAGAAGAGTTTAAATACTGTCAACTCTGCATGTGATGAGGTTAGGAATTCTACCAAATTGAAGGAGATTATGAAGAAAATTCTTTATCTGGGGAATACATTGAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGCTTCAAGCTGGACAGTCTTTTAAAGCTTGCTGATACACGTGCTTCTAATAATAAGATGACACTCATGCACTATCTTTGCAAGGTCCTCGCTTCAAAGACACCAGCTCTTCTAAATTTTCATTTGGACCTGGGTAGCCTCGAGCCAGCAACCAAGATACAATTGAAATCTTTAGCAGAAGAAATGCAAGCTATAATTAAGGGGTTAGAAAAGGTCAGGCAGGAGCTTGTTGCTTCTGAAAGTGATGGTCCAGTCTCTGAAGTTTTTCGCAAGACGCTGAAAGAATTTATTGCTATTGCTGAGACAGAGGTGACATCTGTGACAAATCTATACTCTACTGTGGGTAGAAATGCAGATGCACTTGCACTATATTTTGGTGAGGATCCGGCTCGTTGTCCATTTGAGCAGGTTACAGTGACACTATTGAACTTCGTGAGATTATTTCGGAAAGCCCACGAAGAAAACTGCAAACAGGCTGAATTGGAAAAGAAAAAGGCCGAGAAGGAAGCCGAAATGGAGAATGCCAAAGGAATTAGCCTTACGAAGAAGAGTGTGAAATAG 5190 49.6 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDTPLVLDCLILRVLPLFDGGKGCRPVVRVYGQDPSAPANRTSKLLFSTSIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHMDEDLVHEEMMFRVMFHTAFVRSNIMMLNRDEVDVLWDAREQYPKDFRVEALFLDADAVVPSLTTSFDDEDGNETGAASPEEFFEVEEIFSSVIDGQEAKGSSDPQVVNHINRKEDWKEDFDPPAFQDCDDGNLKHDKKSDFDAVKDITVDDVKYKLDENIYSDLNAVKDIAVDDGDMNSNSFLVAANVPTHAKIQGLVDDAYEKCEGMEEKDDGRDTTPEKLENKVLQKKLSADGSRQKSEKLQTPIPKKQPISSGKPTADMGLAKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYMNSMHVSYPPSRYNSAPAALASIASSKDVNANSKTKAAATTDSLVATDVFTERKNYEVDSVRPSHSAPGNLMLGPSSPVESIEETYSSSETLKPSHSDAQLGVPLPPLPTKPPSPYLPSPRQANEIPPPPPPPPPPPTSFHHIATRSSALPLSASLAPPFIVNSPKAVNTPAPPPPPPPPSSRQNSVLPHSSTQPSWEQIYSSVSTGTVTDSIPPPPPPSSVGMPSTLKNIVSTSPVPVLSPFSALLASSHKGISLPPPPPPPPPPPPPPPPPPSMKHEAPVPPPPPPPPPPPPPPLVHGAFPSPSLMKTAPPPPPPPPPLHSASPALSLLHGAPPPPSPPLSKQRASPPPPPPPPPSIYGAPPPPLPPPPPAVYGAPPPPPAVYGAPPPPPPPPPPAVYGAPPPPPPPPPPAVYGAPPPPPPPPPPAVYGAPSPPPPPPPPAVYGAPPPPPPPPPPAVYGAPPPPPPPPPPAMYGAPPPPPPPPPPPPPSMYGVSPPPPPPPPPSMYGASPPPPSIHGAPPPPPPPPSMFGATPPLTPTMWGVPPPPPPSSMRGAPPPPPPPPMREAPPLPPSLRGAPPPPPPPSMHGAPPPPPPPPPMHGAPPPPPPPIRGALPPPPPPPLHGAPPPPPPPMHGAPPPPPPPGGGRAPPPPPPPGGGRAPPPPGGGRAPPPPPPPGGGGAPTPPPPPGGGRGAPAPPRPPGVGPPPPPPLGAKGANAPPDPRGLSSGRGRGLTRSTATAPRRSSLKPLHWSKVTRALQGSLWEELQRYGEPQIAPEFDVSELETLFSATVPKPADKSGGRRKSVGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDMDNLGKCEQYFLELMKVPRVESKMRVFSFKIQFGSQISEFKKSLNTVNSACDEVRNSTKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLADTRASNNKMTLMHYLCKVLASKTPALLNFHLDLGSLEPATKIQLKSLAEEMQAIIKGLEKVRQELVASESDGPVSEVFRKTLKEFIAIAETEVTSVTNLYSTVGRNADALALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKQAELEKKKAEKEAEMENAKGISLTKKSVK 1729
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 27698462 27718876 + ClG42_06g0170200.10 Clacu06g1702 252350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 522 536 - -
Clacu06g1702 1729 Gene3D - 205 336 - -
Clacu06g1702 1729 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 743 816 - -
Clacu06g1702 1729 FunFam Formin-like protein 1319 1703 - -
Clacu06g1702 1729 PANTHER FORMIN-J 1221 1716 IPR051144 -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 750 766 - -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 635 730 - -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 832 1330 - -
Clacu06g1702 1729 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 662 678 - -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 687 722 - -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 552 566 - -
Clacu06g1702 1729 CDD PTP_PTEN-like 16 190 - -
Clacu06g1702 1729 SMART it6_source 710 1727 IPR015425 -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 767 792 - -
Clacu06g1702 1729 SMART PTEN_C2_2 198 338 IPR014020 -
Clacu06g1702 1729 Pfam Formin Homology 2 Domain 1324 1691 IPR015425 -
Clacu06g1702 1729 Gene3D Formin, FH2 domain 1316 1703 IPR042201 -
Clacu06g1702 1729 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 913 1299 - -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 836 906 - -
Clacu06g1702 1729 Coils Coil 1692 1721 - -
Clacu06g1702 1729 Coils Coil 1598 1618 - -
Clacu06g1702 1729 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1280 1711 - -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 1704 1719 - -
Clacu06g1702 1729 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 1704 1729 - -
Clacu06g1702 1729 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Clacu06g1702 1729 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1319 1717 IPR015425 -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 491 521 - -
Clacu06g1702 1729 MobiDBLite consensus disorder prediction 491 575 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g1324 Clacu-Chr6:24173019 Clacu06g1702 Clacu-Chr6:27698462 5.10E-226 dispersed
Clacu06g1702 Clacu-Chr6:27698462 Clacu07g0225 Clacu-Chr7:2651977 8.00E-203 dispersed
Clacu04g1265 Clacu-Chr4:26752246 Clacu06g1702 Clacu-Chr6:27698462 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g1702 K28090 - csv:101215105 1321.99