Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g1755 ATGGAAGTTTTTGGGTTTATGCCAAACAAATGGATTGCAACCGCCCTTGGAATTTGGATTCAATGTATCTGCGGTGCTTCCTACACCTTCAGCATCTATTCTTCCGCTCTCAAGTCCTCCCAGGCCTACGATCAATCCACCCTCGACATCGTTTCCGTTTTCAAAGACATCGGCGCCAACGCCGGCATCATTTCTGGTTTTCTTTACTCCGCCGTCACTCCCCCAGCCCCCCGCTGGGCCTTTGCCGGGCCATGGGTGGTTCACGCCGCCGGAGCGATTCAGTGCTTCCTCGGATATATATTCATATGGGCCGCTATCTCTGGAGTGATCGATCGGCCGCCGGTGCCGGCGATGTGCTTCTTCATGTTTCTGGCTGCACATGCGCAAACGTTTTTCAATACGGCGAATGTGGTAACTGGCGTGCACAATTTTGCGCACTATAGCGGGACGATTGTGGGAATCATGAAGGGATATCTTGGTCTCAGTGGAGCACTGCTAATCCAAGTTTATAATACGACTTGCAATGGAGATCCAAGCAATTTTCTCCTCATGCTGGCAGTTTTGCCCACACTTCTTTCCATCATGTTCATGTGGTTTGTTAGAATTGACAAAACAAAGTCTAGTAATGAGATGAAGCATTTGAATTCATTGTCTGCACTTGCTGTGATAGTTGCTTTTTACCTAATGGTTGTAATCATCTTGAACAACACTTTCTCCCTTTCATCATGGACTCGTTTCTTTACATTCTCCATACTCTTGATTCTCCTTGCTGCTCCTCTTGCAATCGCCATTAATGCTCAGAGGGAAGACTTTAGAGAGTCATCTCCATCATTCCTCACTGAAAAAAGTCATGTTGTTAACAAACTCAAGTCAATGGATGCAGAGGATTCTGTTGAATATCATGAGTTGCCCAGGGATGAGAGCCAGACAGTGGCTGTTTCCAACTCTAGAATTCCTCAAGCCATGAATGTCTTGGAAGCTATACGCACTATAAACTTCTGGCTGTTGTTTCTTGCCATGGTGTGTGGAATGGGTTCTGGATTGGCCACAATAAACAACATGAGCCAACTTGGCCAGTCTCTTGGTTACACAGCAACAGAGACGAAGACATTTGTTTCGTTATGGAGTATATGGAACTTTCTTGGACGTTTTGGAGCTGGTTACACCTCTGATTTTCTTCTCCACTCATATGGGTGGGCAAGGCCATTGTTAATGGCAATTACTCTAATGATAATGAGTGGCGGCCACATCGTGATCGCCTCCGGTTTCTCTGGAAATCTGTATGTGGGTTCAATTCTTATTGGCATATGCTATGGCTCACAATGGTCATTGATGCCTACAATCACTTCAGAGATATTTGGTTTAGAGCATATGGGTACTATTTTCAACACCATAGCCATCGCCAGCCCTTTGGGGTCTTACATTTTTTCTGTTCGAGTAATCGGTTACATTTACGACAGAGAAGCTGCCGGAGAACATGGCTCCTGCTCTGGTACACACTGTTTGTTGATATCTTTTCTTGTCATGGCCGTCGTGGCTTTCTTGGGATCTCTTGTTGTTGCTGCACTCTTCTTCCGAACCAGGAGATTTTACCGACTGGCGTTGCAAAGAAGAGTGGAATGTCTCTAA 1629 45.73 MEVFGFMPNKWIATALGIWIQCICGASYTFSIYSSALKSSQAYDQSTLDIVSVFKDIGANAGIISGFLYSAVTPPAPRWAFAGPWVVHAAGAIQCFLGYIFIWAAISGVIDRPPVPAMCFFMFLAAHAQTFFNTANVVTGVHNFAHYSGTIVGIMKGYLGLSGALLIQVYNTTCNGDPSNFLLMLAVLPTLLSIMFMWFVRIDKTKSSNEMKHLNSLSALAVIVAFYLMVVIILNNTFSLSSWTRFFTFSILLILLAAPLAIAINAQREDFRESSPSFLTEKSHVVNKLKSMDAEDSVEYHELPRDESQTVAVSNSRIPQAMNVLEAIRTINFWLLFLAMVCGMGSGLATINNMSQLGQSLGYTATETKTFVSLWSIWNFLGRFGAGYTSDFLLHSYGWARPLLMAITLMIMSGGHIVIASGFSGNLYVGSILIGICYGSQWSLMPTITSEIFGLEHMGTIFNTIAIASPLGSYIFSVRVIGYIYDREAAGEHGSCSGTHCLLISFLVMAVVAFLGSLVVAALFFRTRRFYRLALQRRVECL 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28132589 28135385 + ClG42_06g0175500.10 Clacu06g1755 252403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g1755 542 Pfam Nodulin-like 10 264 IPR010658 -
Clacu06g1755 542 Gene3D MFS general substrate transporter like domains 211 525 IPR036259 -
Clacu06g1755 542 CDD MFS_Mch1p_like 10 516 - -
Clacu06g1755 542 SUPERFAMILY MFS general substrate transporter 216 529 IPR036259 -
Clacu06g1755 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 531 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g1755 Clacu-Chr6:28132589 Clacu06g1757 Clacu-Chr6:28143865 6.00E-157 dispersed
Clacu06g1755 Clacu-Chr6:28132589 Clacu06g1756 Clacu-Chr6:28138914 1.50E-155 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g1755 - - - 0.0