Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g1757 ATGGAATTGAAATCGGAGACTTCCAGTTTTAGCAACAAATGGGTATCAACAGTTGCTAGCGTATGGATTCAATGCACTAGCGGATCTCTTTACACTTTCTCCATATACTCCCAAACCCTCAAATCAACTCAGGGATACGATCAATCCACTTTGGATATTGTTTCTGTTTTCAAAGACATCGGTGTCAATTGTGGCGTCCTTGCGGGCTTTCTCTATTACTATTCCACCGCTGATGGTCGTCGTCCTGGGCCGTGGATTGTTCACTTGGCCGGTGCAATTCAGTGCTTCTTGGGGTATTTCTTTATCTGGGCTGCCGTTTCTGGGGTCTTTCCTCGGCCGGCGGTTCCCGTTATGTGCCTTTTCATGTTGGTGGCTGCTCATGCTCAGAGTTTCTTCAACACGGCTAACGTTGTCACTGGCGTTCGGAATTTCCCCAGTTATAGTGGGACGATTGTTGGAATCATGAAGGGGTTTCTTGGTTTGAGTGGAGCAATATTGATTCAAGTATACGAGACAATATTTAATGGGCAACCTACTTCGTTTCTTCTGATGTTGGCGCTGCTTCCAGCCCTTAATTCCTTATTGTGTATGTGGTTCGTGAGAATCCACCATGCAGATAATGGGATTGAAAAAGAGCATCTGAATACCCTATCCATAATTACTCTGCTCGTTGCTACTTACCTTATGATCAAGATAGTTCTAGAGCATATTTTCACCTTCCAATTCCCTTTACATGTTGCTACATTTGTTCTACTTTTGATGTTGCTTGCATCTCCTCTATATATTGCAATTAGAGCCCAACAGAGAGAGTCCAGAAGTATTTTGCACCCTTCTTTTACTGAGAGCGACCGGCTGATTGGTCGCTCCAATCAAGAGACTTCGGATTTTGACTATGAACGGAGAAGGGAATCTGAAGAAAGCCTGAACCTCTTTCAAGCTTTGTACACAATAGACTTCTGGATATTGTTTTTTGCGACTGCTTGTGGCATGGGAACAGGGTTAGCTACAGTGAATAATATCAGCCAGATAGGATTATCTCTCGGTTATACAAGCTTGGAGATAAATACTTTGGTTTCGTTGTGGAGTATTTGGAACTTTTTTGGTCGTTTTGGAGCTGGGTATGTGTCAGATTATTTTCTGCATGTCAAAGGATGGGCTAGGCCGTTGTTCATGTTCATCACTCTGACAACCATGGGCATTGGACATGTAGTGATTGCTTCTGGCCTGCCTGGTGCTCTTTTTGCTGGTTCGGTAGTAGTGGGTGTTTGTTATGGGTCTCAGTGGTCACTAATGCCAACAATTGCTTCTGAAATATTTGGTGTTGTACACATGGGTACTATATTCAATGCCGTAACAGTAGCAAGCCCTGTTGGATCTTATTTATTTTCAGTTAGAGTTGTTGGCCCTTGGCTTATTTTTCTGGAGAAGAAGTTTCTACGATCAAGTTGTTATCAGAAGGCTGCAACACTCATGAAATGTGGAGGTTTTTCCTGGTTGCTGCTAGTAAGTGCCTGTCCAGCCTACAACATATGCTGTCGTGAAGCAAGAATCAGCCAGAATGGATGA 1566 43.42 MELKSETSSFSNKWVSTVASVWIQCTSGSLYTFSIYSQTLKSTQGYDQSTLDIVSVFKDIGVNCGVLAGFLYYYSTADGRRPGPWIVHLAGAIQCFLGYFFIWAAVSGVFPRPAVPVMCLFMLVAAHAQSFFNTANVVTGVRNFPSYSGTIVGIMKGFLGLSGAILIQVYETIFNGQPTSFLLMLALLPALNSLLCMWFVRIHHADNGIEKEHLNTLSIITLLVATYLMIKIVLEHIFTFQFPLHVATFVLLLMLLASPLYIAIRAQQRESRSILHPSFTESDRLIGRSNQETSDFDYERRRESEESLNLFQALYTIDFWILFFATACGMGTGLATVNNISQIGLSLGYTSLEINTLVSLWSIWNFFGRFGAGYVSDYFLHVKGWARPLFMFITLTTMGIGHVVIASGLPGALFAGSVVVGVCYGSQWSLMPTIASEIFGVVHMGTIFNAVTVASPVGSYLFSVRVVGPWLIFLEKKFLRSSCYQKAATLMKCGGFSWLLLVSACPAYNICCREARISQNG 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28143865 28148892 + ClG42_06g0175700.10 Clacu06g1757 252405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g1757 521 SUPERFAMILY MFS general substrate transporter 9 203 IPR036259 -
Clacu06g1757 521 CDD MFS_Mch1p_like 13 468 - -
Clacu06g1757 521 Gene3D MFS general substrate transporter like domains 312 512 IPR036259 -
Clacu06g1757 521 Pfam Nodulin-like 13 264 IPR010658 -
Clacu06g1757 521 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 493 - GO:0016020(PANTHER)
Clacu06g1757 521 SUPERFAMILY MFS general substrate transporter 219 464 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g1755 Clacu-Chr6:28132589 Clacu06g1757 Clacu-Chr6:28143865 6.00E-157 dispersed
Clacu06g1757 Clacu-Chr6:28143865 Clacu10g1973 Clacu-Chr10:33252910 2.90E-79 dispersed
Clacu06g1756 Clacu-Chr6:28138914 Clacu06g1757 Clacu-Chr6:28143865 4.80E-132 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g1757 - - - 0.0