Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g1781 ATGACGTCAGCCTTCGCTCGACGCGGTTTCAAGGGCCATTCCGCCACCCACACGCTCTCGCTTTCTCTGACTGACACACCAATCCACTCTCCTTTGCCCCTTTTGCTTTTGCCTTTCGCTCCAACGGAAATATCTCAAACGATCTTCTTCTTCTTCTTCACTTCTGGCTTATACTCTTCTTCTTCGCCGCCGGACTCGGCCACACCACCATTTTCTTCTTTTCCAGACCGACCCAGAAAGTTTTGA 246 50.81 MTSAFARRGFKGHSATHTLSLSLTDTPIHSPLPLLLLPFAPTEISQTIFFFFFTSGLYSSSSPPDSATPPFSSFPDRPRKF 81
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 28333035 28333280 + ClG42_06g0178100.10 Clacu06g1781 252429

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g1781 81 MobiDBLite consensus disorder prediction 58 81 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g1781 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g692 . . Bda06g00578 . . . . Bma12g01024 . . Cma10g00147 . Car10g00139 . Sed12g1901 . . Bhi02g00397 Tan09g2203 Cmetu02g1301 . Hepe09g0172 . . Cla06g01639 Cam06g1822 Cec06g1871 Cco06g1877 Clacu06g1781 Cmu06g1722 Cre06g2541 Cone2ag0884 . . . . . . . . Blo15g00281 . . Bpe07g00819 . . . . Cmo10g00158 . . . . . . Cpe18g00827 . . . . . . . . . . . . . . Lsi06g01522 Csa01g00178 Chy02g02554 Cme02g01941
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0021838 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 3