Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu06g1849 ATGGAGACTCTTCTTCATCATCTTCTTCCTCTTCAACTGTCACTTCATTCAATTTCCTTCACTATTTTCATCCTCATCCTCATCTTCCTTCTCCAAAAATGGCTTCTCTCCCCTTCACAAACTTCCCCTCCATCACCCCCAAAGCTTCCAATCTTCGGCCATCTTCTCAACCTCGGCTCCCATCCTCATCTCACTCTCCTAAACTACGCCCGCCGCCATGGTCCTCTGTTTCTCCTCCGCCTCGGCTCTGTTCCCACCATCGTCGTTTCTTCCTCCGATCTCGCTCGTGATATCATGAAAACCCACGATCTCGTCTTCGCCAACCGACCCAAATCAACCATTGGCCACAAGCTTCTTTACAGCTCCAGAGACATAGCCGCTTCTCCCTACGGCGAGTACTGGCGGCAGATGAAAAGCGTTTGCGTTCTTCATCTCTTGAGCAGCAAAAGAGTTCAATCCTTCCGTTCTATAAGGGAAGAAGAAGTCAAATTCATGATCGAGAAGATCCAACACAACCCTGTTTCGGTGAATTTGACTGAAATCTTCTCTGGATTGACTAACAATGTGATTTGCAGAGTGGGTTTAGGGAGAAAATACGGAGAGGGAGAAGATGGGAAGAAGTTCATGGATCTTTTATTGGAATTTGGGCAGTTATTGGGGAGTTTTAGCATTAGAGATTTCATTCCTTGGTTGGGTTGGATTGATGGGATTAGTGGGCTGGATTCTAAAGCAAACAGAGTAGCTAAAGAGCTGGATGATTTCTTTAACAGAGTGATTGAAGATCATATCAATCTAGAAAACAGAGACCAGCATTTTGATGAGCATAAGGATTTGGTAGATGTTTTGCTTTGGATACAGAGAGAAAACTCCATTGGTTTTCCCCTTCAGATGGATAGCATCAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACAACTTACACAGTATTAGAATGGGCAATGTCAGAATTGTTGAAACACCCAGAAGCCATGGAGAAACTGAAGAATGAAATTAAAGAAATAAAAGGTGATCACAAAGGGTGCTATGTAAACGAGGATGATTTAGACAAAATGGTATATTTAAAGGCAATAATCAAAGAGACATTGCGACTACACCCACCCATCCCACTTCTCGTTCCGAGAGAATCAACCCAACACATAAAGTTAAGAGGGTATGACGTTAAACGTGGGACTCGAGTTGTGATCAATGCATGGGCAATCGGAAGAGACCCAAAATTATGGGAAGAAGCAGAGGAGTTTCGACCAGAAAGGTTTATGAACAATTCAATAGATTTCAAGGGTCAGGATTTTGAGTTGATCCCATTTGGTGCAGGGAGAAGAGGATGTCCTGGAATTGTATTTGCCACTATGATTAATGAGATAGCTTTAGCAAATTTGGTGCATATGTTTGAGTGGATATTGCCAAATGGTGAGGATTTGGACATGACAGGAACCTTTGGTTTAACCATTCATAGAAAGTTTCCACTTGTGGCTACCGCAGTTGAATGA 1515 42.97 METLLHHLLPLQLSLHSISFTIFILILIFLLQKWLLSPSQTSPPSPPKLPIFGHLLNLGSHPHLTLLNYARRHGPLFLLRLGSVPTIVVSSSDLARDIMKTHDLVFANRPKSTIGHKLLYSSRDIAASPYGEYWRQMKSVCVLHLLSSKRVQSFRSIREEEVKFMIEKIQHNPVSVNLTEIFSGLTNNVICRVGLGRKYGEGEDGKKFMDLLLEFGQLLGSFSIRDFIPWLGWIDGISGLDSKANRVAKELDDFFNRVIEDHINLENRDQHFDEHKDLVDVLLWIQRENSIGFPLQMDSIKALILDMFAAGTDTTYTVLEWAMSELLKHPEAMEKLKNEIKEIKGDHKGCYVNEDDLDKMVYLKAIIKETLRLHPPIPLLVPRESTQHIKLRGYDVKRGTRVVINAWAIGRDPKLWEEAEEFRPERFMNNSIDFKGQDFELIPFGAGRRGCPGIVFATMINEIALANLVHMFEWILPNGEDLDMTGTFGLTIHRKFPLVATAVE 504
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 29002559 29004667 + ClG42_06g0184900.10 Clacu06g1849 252497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu06g1849 504 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 Gene3D Cytochrome P450 37 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 Pfam Cytochrome P450 43 490 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 CDD CYP71-like 72 498 - -
Clacu06g1849 504 SUPERFAMILY Cytochrome P450 43 502 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu06g1849 504 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu06g1849 504 FunFam Cytochrome P450 83B1 30 501 - -
Clacu06g1849 504 PANTHER CYTOCHROME P450 71B11-RELATED 21 500 IPR050193 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0320 Clacu-Chr3:3707697 Clacu06g1849 Clacu-Chr6:29002559 2.00E-125 dispersed
Clacu03g0324 Clacu-Chr3:3740623 Clacu06g1849 Clacu-Chr6:29002559 6.60E-99 dispersed
Clacu03g0325 Clacu-Chr3:3755480 Clacu06g1849 Clacu-Chr6:29002559 9.40E-60 dispersed
Clacu05g2801 Clacu-Chr5:35353012 Clacu06g1849 Clacu-Chr6:29002559 1.30E-105 dispersed
Clacu05g2802 Clacu-Chr5:35355450 Clacu06g1849 Clacu-Chr6:29002559 8.50E-113 dispersed
Clacu06g1849 Clacu-Chr6:29002559 Clacu07g1463 Clacu-Chr7:29277852 1.30E-100 dispersed
Clacu10g1717 Clacu-Chr10:30680197 Clacu06g1849 Clacu-Chr6:29002559 3.20E-78 dispersed
Clacu01g0564 Clacu-Chr1:5658040 Clacu06g1849 Clacu-Chr6:29002559 1.40E-72 transposed
Clacu07g1193 Clacu-Chr7:26765762 Clacu06g1849 Clacu-Chr6:29002559 1.60E-15 transposed
Clacu11g0178 Clacu-Chr11:1505425 Clacu06g1849 Clacu-Chr6:29002559 8.80E-70 transposed
Clacu05g2793 Clacu-Chr5:35283035 Clacu06g1849 Clacu-Chr6:29002559 3.10E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu06g1849 - - - 0.0