Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu06g1882 | ATGATCTACTTCTCCGTGTCCTTCTTCTTACTTCTCTCAAGTTCTTTATGGGCTTTCTTTCTTCTCTATCTTTGCATCTCTAAATTCTACTGCTTCTCTAGAAAGCGCTTTTACTATTCTCCACCTTCTTACCCCTTCTTCGGTTGCTTGATTTCCTTTTACAAAAACCGGCGCCGCCTTCTGGCATGGTACACCGACCTGCTGTCCGATTCGCCGACTCAGACCATTGTGGTGCACCGGCTCGGTTCGAGGCGGACCGTTGTGACGGCTAACCCAGCCAATGTGGAGCACATGCTCAAGACCAATTTCATTAATTACCCTAAAGGAAAGCCGTTTACTGATATACTCGGCGATCTACTCGGCTGTGGCATTTTTAACGTCGACGGCGATTTGTGGTCCAGCCAACGCAAGCTCGCCAGTCATGCATTTTCCGCTAAGTCTCTAAGAGAATTCGTCGTTAAGACGCTTGAAGATGAAGTTCATCTCCGTTTGATTCCGTTGCTCAGTAACGCTGCTCGAACTAACGCCGTCATTGATTTGCAAGATGTTTTGGGAAGACTCGCTTTTGACACCGTTTGTAAGGTGACGCTGGGAACGGATGAGCAATGCTTGGACATGTCGCGTCCAATTCCAGAAATAGTAAATGCATTCGACACGGCAACGGGGATCAGTGCAAAGCGAGCAATAGCGCCACTATTTCTCACATGGAAGGCCAAGCGCATGCTCAACGTTGGCTCCGAAAAGAAGCTCAAAGAAGCGGTTCAAATGGTCCACAAATGGGTCTCTAATATCATTCGCAATAAAAACAATAATACCCTCCATAACCATAACCAAACACACAACAATGATTTGTTATCCCGCCTCTTGTCGACCAACCACGACGAGGAAGTCGTTAGAGACATGATTATTAGCTTCATAATGGCCGGCCGTGACACCACCTCCGCCGCCATGACATGGCTCTTCTGGTTGCTCACAAAGCACCCAAAAGCCGAACAGGCCATAATCAACGAAGCTACTTCATTGTCCGACGATTCAAAAACCATGTCGTTGGGTTATGGTTACGAAGAATTGAAGGATATGAAGTATTTGAAAGCGTGTTTATGCGAGTCCATGCGGCTATACCCGCCAGTGGCTTGGGATTCGAAGCACGCGGCGGCAGCGGACATTCTCCCGGACGGAACTCCGGTGAGGAAAGGGGACAGAGTCACGTATTTTCCGTACGGAATGGGGAGGATGGAGGAGGTATGGGGGAAAGACCGGCTTGAATTCAAACCGGACCGGTGGTTCCAAAACGGGGAGTTGAAAACGGTCAGCCCGTTCAAGTTCCCGGTCTTTCAAGCGGGTCCGAGGATGTGCTTGGGAATGGAAATGGCGTTCATTCAGATGAAATACGTGGTGGCCACGGTTTTGAAGCGGTTTGAATTTAGACCAGCGAGTGAAAATTCTCCGGTTTTTGTCCCATTGTTGACAGCGCATATGGCGGGTGGACTACGGGTTTATGTTAGGGAAAGGATAGAACAAAAGTCAACTATGTGGAGTTTTGATTTTATAGCATCGAGCAAGTGCAAGAAGACCGAGAGGACCGCACCTAGTCCGACGATATCTATCTCAAGCTCCCCGTCAAGGTCAGGAGGCACAGATAACCAGGCCTTGGGTTTGAAGATGCCCATCTTAGATCTAGTGATCATGGGGGAAGAAACAGAAGGTGAGGTCGGAGTAGAGAAGGCAAGATTATCAGTAGGAATAATGGGAGAAAGACGCGAGGCAGATGATAGAATCTCAATGGAGGCAGAGAAAGAGGTTCTTCCTACCACTGAAGCGGGTCTTAAACCACTTCACATTCTCAAATCTACAGACCCACCTCTCTGGCTTGCTCCAAGCCCTTCCCTATCTAAAGTTGCTCGCCTTGCCTCACAGAATTTATTTTCTATGCTGAAACCATTCAGTCCTAAATCTCCATTTGATCATCTCCTGGTTGATGGATTTGATGCCGAGCAGATATGGCAACAAATTGACCTCCAATCACAACCTCTTTTGGCAAGTGTTCACCGGGATTTGAAGCGGTTTGAGAAGAATCCAGAAGCAATTTCGAACCTGAAGGTTTCTTTGGAGGATAAGAAGGTTATTCAAGAGATGGCTATAGGGTTGGAGGAAGAAAGTGATGATTTTGAAGAAGACATAAAGGAGTTTGATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAATGAGGAGGACGAGGAGGAAGAAGAGGACTATGATGACGAAGAAGATGGAGACCCTGAGGAAGAGAGTGAAGATGAAGTTGAGGGTGAAGAAGGTAATGGTGGGATTGAGGATGGATTTTTAAAGATAAAGGAGCTAGAGGAGTTCATGGAGGAGGATGAGGTAAGGGAATATGGTTTACAGAAGAAGAAAGACGGTAAGAAGGAAAAGAAACAGAGGAAGGTAGAAGAAGAGTCTGAGGACGATGAAGATGATGAGCTTGGGGAGTTTGACCTTCATGGCGAAGAGGATGAAGAGAGCAAACTGGAAAAGGCGAGGGTCCTCTCACTTTTCAGAGTACACATTTTTGCCGTTCAGTTTTCCTTTCGCAGCGCTGACCATCACCTCTACACTCTACTAATATACGAAGACTTTTTTGGTGCTAAAAAGAAGAATCTTGGTAGAAGAAAATCTAAATTGACAACTGGATCAGGGTCTGAACTCTCAGATTCAGGTGATGAAGAGGAAGAGGAAGATAATGAAGCACATGCAGAACAGAAGTCACAAAATCTTTCAACTCATCAAAAACAACTTAAGAAGCTTCAAGCTGAAATAGAGATGATGGAGAAAGCAAATTTGGAGCCCAAAACGTGGACCATGCAGGGAGAGGTAACCGCGGCAAAAAGACCTAAGAATAGTGCTTTGGAAGTTGATCTAGATTTTGAGCACAATGTGAGACCACCACCGGTAATCACAGAAGAAGTTACAGCAACGTTGGAAGAGATGATCCAGAAAAGGATCCTTGAGGGGCGTTTTGACGAAGTTCAGAAAGCACCTAAACGGCCTACTAAAGCACCTAGAGAAATCAAAGACTTGGATGAGAATAAAAGCAAGAAAGGTCTTGGTGAAATATACGAGGAAGAGTATGTTGAAAAGACTAATTTGGCTACAGCCCCATCATCATTCACCGATGAAGCGAAGCAAGAGGCGAGCTTACTTTTCAAGAAACTTTGCTCCAAGTTGGATGCTCTCTCCCATTACCACTACGCCCCAAAACCTGTCATAGAGGATATGTCTATATCGGTGAATGTCCCTGCTCTAGCAATGGAAGAGGTTGCTCCTGTTGCTGTCTCGGATGCGGCAATGCTCGCTCCAGAGGAAGTTTTTGCTGGCAAAGGTGAAATCAAAGAAGCAGCAGAACTTACACAATCCGACAGGAAGAGGAGGAGGGCCAACAAGAAAAGGAAATATAAAGCTATGGTGGCCAAAAGAGACGCGAAGAAGGCAAAAAATACTGCAGTTCGAAATGCCAATGAAGGTAATATCAGAAATTCAGAATATCAGAAACTTGGAGAGGAATCATCTTCACAATCCACCTTATTTGTCAAAGTTGAGAAATGGCTTTGGGGAAAAGAAACTATAAGTGAGGAATAG | 3636 | 45.57 | MIYFSVSFFLLLSSSLWAFFLLYLCISKFYCFSRKRFYYSPPSYPFFGCLISFYKNRRRLLAWYTDLLSDSPTQTIVVHRLGSRRTVVTANPANVEHMLKTNFINYPKGKPFTDILGDLLGCGIFNVDGDLWSSQRKLASHAFSAKSLREFVVKTLEDEVHLRLIPLLSNAARTNAVIDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPIPEIVNAFDTATGISAKRAIAPLFLTWKAKRMLNVGSEKKLKEAVQMVHKWVSNIIRNKNNNTLHNHNQTHNNDLLSRLLSTNHDEEVVRDMIISFIMAGRDTTSAAMTWLFWLLTKHPKAEQAIINEATSLSDDSKTMSLGYGYEELKDMKYLKACLCESMRLYPPVAWDSKHAAAADILPDGTPVRKGDRVTYFPYGMGRMEEVWGKDRLEFKPDRWFQNGELKTVSPFKFPVFQAGPRMCLGMEMAFIQMKYVVATVLKRFEFRPASENSPVFVPLLTAHMAGGLRVYVRERIEQKSTMWSFDFIASSKCKKTERTAPSPTISISSSPSRSGGTDNQALGLKMPILDLVIMGEETEGEVGVEKARLSVGIMGERREADDRISMEAEKEVLPTTEAGLKPLHILKSTDPPLWLAPSPSLSKVARLASQNLFSMLKPFSPKSPFDHLLVDGFDAEQIWQQIDLQSQPLLASVHRDLKRFEKNPEAISNLKVSLEDKKVIQEMAIGLEEESDDFEEDIKEFDEEEEEEEEEENEEDEEEEEDYDDEEDGDPEEESEDEVEGEEGNGGIEDGFLKIKELEEFMEEDEVREYGLQKKKDGKKEKKQRKVEEESEDDEDDELGEFDLHGEEDEESKLEKARVLSLFRVHIFAVQFSFRSADHHLYTLLIYEDFFGAKKKNLGRRKSKLTTGSGSELSDSGDEEEEEDNEAHAEQKSQNLSTHQKQLKKLQAEIEMMEKANLEPKTWTMQGEVTAAKRPKNSALEVDLDFEHNVRPPPVITEEVTATLEEMIQKRILEGRFDEVQKAPKRPTKAPREIKDLDENKSKKGLGEIYEEEYVEKTNLATAPSSFTDEAKQEASLLFKKLCSKLDALSHYHYAPKPVIEDMSISVNVPALAMEEVAPVAVSDAAMLAPEEVFAGKGEIKEAAELTQSDRKRRRANKKRKYKAMVAKRDAKKAKNTAVRNANEGNIRNSEYQKLGEESSSQSTLFVKVEKWLWGKETISEE | 1211 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 29264809 | 29278880 | - | ClG42_06g0188200.10 | Clacu06g1882 | 252530 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu06g1882 | 1211 | CDD | CYP86A | 74 | 497 | - | - | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 1168 | 1184 | - | - | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 1142 | 1157 | - | - | |
| Clacu06g1882 | 1211 | SUPERFAMILY | Cytochrome P450 | 30 | 504 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PANTHER | CYTOCHROME P450 | 25 | 497 | - | - | |
| Clacu06g1882 | 1211 | Gene3D | Cytochrome P450 | 21 | 514 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | Coils | Coil | 918 | 945 | - | - | |
| Clacu06g1882 | 1211 | Coils | Coil | 713 | 755 | - | - | |
| Clacu06g1882 | 1211 | Pfam | Mpp10 protein | 650 | 1158 | IPR012173 | GO:0005634(InterPro)|GO:0005732(InterPro)|GO:0006364(InterPro)|GO:0034457(InterPro) | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 527 | 549 | - | - | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 890 | 934 | - | - | |
| Clacu06g1882 | 1211 | PRINTS | E-class P450 group IV signature | 360 | 376 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PRINTS | E-class P450 group IV signature | 452 | 470 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PRINTS | E-class P450 group IV signature | 299 | 325 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PRINTS | E-class P450 group IV signature | 411 | 429 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PRINTS | E-class P450 group IV signature | 394 | 408 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 1136 | 1184 | - | - | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 715 | 774 | - | - | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 527 | 548 | - | - | |
| Clacu06g1882 | 1211 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PRINTS | P450 superfamily signature | 452 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PRINTS | P450 superfamily signature | 308 | 325 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | PRINTS | P450 superfamily signature | 443 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 807 | 844 | - | - | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 819 | 834 | - | - | |
| Clacu06g1882 | 1211 | MobiDBLite | consensus disorder prediction | 715 | 780 | - | - | |
| Clacu06g1882 | 1211 | Pfam | Cytochrome P450 | 41 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu06g1882 | 1211 | FunFam | Cytochrome P450 | 32 | 507 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g1505 | Clacu-Chr5:18462888 | Clacu06g1882 | Clacu-Chr6:29264809 | 3.90E-161 | dispersed | |
| Clacu06g1882 | Clacu-Chr6:29264809 | Clacu07g0067 | Clacu-Chr7:1067521 | 1.40E-116 | dispersed | |
| Clacu06g1882 | Clacu-Chr6:29264809 | Clacu01g1276 | Clacu-Chr1:22650366 | 2.90E-114 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu06g1882 | K20665 | - | csv:101202989 | 870.922 |