Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0092 ATGGGAAAAGAGCAATTAGAAGTACTAAATGCACTTGATGTAGCAAAAACACAATGGTACCATTTCACAGCAATCATAATTGCTGGAATGGGATTCTTCACAGATGCATATGATCTATTTTGCATATCTCTTGTGACAAAATTACTTGGACGAATATACTATCATGTTGATGGTGCAGCAAAGCCAGGTACATTGCCTCCAAATGTTGCTGCTGCTGTTAATGGTGTGGCATTTTGTGGAACTCTAGCAGGCCAACTCTTCTTTGGTTGGTTGGGTGACAAAATGGGAAGAAAAAGAGTTTATGGGATGACTCTAATGTTGATGGTTATATGCTCCATAGGCTCAGGCCTTTCCTTTGGCCACAATTCACAATCTGTTATGACTACTCTTTGCTTCTTTCGGTTTTGGCTCGGCTTCGGTATTGGTGGCGATTACCCTCTTTCTGCAACCATCATGTCCGAGTACTCGAATAAGAAGACTCGTGGTGCCTTCATTGCTGCAGTGTTTGCTATGCAAGGGTTTGGAATTTTGGGTGGAGGTATATTTGCCATTTTCATCTCTTTGGCATTCAAGGCCAGGTTTGATGCTCCACCCTATGCACTTGATCCAACTAAATCAACTGTGCCACAAGCAGATTACATTTGGAGGATAGTTCTCATGGTTGGGGCTCTTCCTGCTGCTCTTACTTATTATTGGAGGATGAAAATGCCTGAAACGGCACGGTATACGGCTTTGGTAGCAAAAGATACAACTCAAGCTGCATCAGATATGTCAAAAGTTTTGCAGATGGAAATTGAGGCAGAAGCACAAAACCCTGCTACGCATACGCCAAATGCAAGTGCAGGTGCAAGTGCATACGACTTGTTCTCCAAAGAATTCTTCCGTCGCCATGGAACTCACTTACTTGGAACTACAATTACTTGGTTTTTACTTGATATTGCATTTTATAGTCAAAACTTGTTTCAAAAAGATATATTTAGTGCAATTGGATGGATTCCTCCAGCAGCCACTATGAATGCAATTGAAGAAGTTTTCAGAATAGCAAGGGCTCAAACACTCATTGCCCTCTGCAGCACTGTCCCTGGCTATTGGTTCACAGTGGCTTTCATTGACAAAATGGGAAGATTTGCCATTCAACTCATGGGATTCTTCTTCATGACAGTCTTCATGTTTGCTTTAGCCATTCCATACCATCATTGGACTCTGAAGGACAATCAGATTGGCTTTGTTGTCCTCTACTCACTAACGTTCTTTTTTGCGAATTTTGGACCGAATGCAACAACTTTTGTTGTCCCAGCTGAAATCTTTCCAGCACGATTCCGTTCTACTTGCCACGGTATATCATCAGCATCCGGGAAGCTTGGAGCTATGGTGGGTGCATTTGGTTTTCTATATTTGGCTCAAAACCAGGACAAGAACAAAACCGATGCAGGATATCCTCCTGGCATTGGTGTTAAGAACTCACTTCTATTGTTAGGTGGACTTAACTTCTTAGGAATATTATTTACTTTTCTCGTGCCTGAAGCGAAAGGAAAATCGTTGGAAGAGATGTCGGGCGAAAATGAAGATGGAACCATTGGAGAATTGGGGGGCCAACCACGTACCAATGATACAGTCTCACATGTTTAG 1629 42.23 MGKEQLEVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAAKPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSIGSGLSFGHNSQSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILGGGIFAIFISLAFKARFDAPPYALDPTKSTVPQADYIWRIVLMVGALPAALTYYWRMKMPETARYTALVAKDTTQAASDMSKVLQMEIEAEAQNPATHTPNASAGASAYDLFSKEFFRRHGTHLLGTTITWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIEEVFRIARAQTLIALCSTVPGYWFTVAFIDKMGRFAIQLMGFFFMTVFMFALAIPYHHWTLKDNQIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDKNKTDAGYPPGIGVKNSLLLLGGLNFLGILFTFLVPEAKGKSLEEMSGENEDGTIGELGGQPRTNDTVSHV 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 1336078 1337706 + ClG42_07g0009200.10 Clacu07g0092 252690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0092 542 NCBIfam phosphate:H+ symporter 11 520 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Clacu07g0092 542 MobiDBLite consensus disorder prediction 515 542 - -
Clacu07g0092 542 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 516 - -
Clacu07g0092 542 FunFam Inorganic phosphate transporter 1-6 20 529 - -
Clacu07g0092 542 Pfam Sugar (and other) transporter 26 518 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu07g0092 542 SUPERFAMILY MFS general substrate transporter 12 518 IPR036259 -
Clacu07g0092 542 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 511 IPR020846 GO:0022857(InterPro)
Clacu07g0092 542 Gene3D MFS general substrate transporter like domains 20 531 IPR036259 -
Clacu07g0092 542 CDD MFS_PhT 25 510 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0092 Clacu-Chr7:1336078 Clacu11g2079 Clacu-Chr11:31635177 1.90E-142 dispersed
Clacu07g0111 Clacu-Chr7:1569448 Clacu07g0092 Clacu-Chr7:1336078 0.00E+00 transposed
Clacu08g0693 Clacu-Chr8:16525829 Clacu07g0092 Clacu-Chr7:1336078 7.70E-229 transposed
Clacu05g0483 Clacu-Chr5:4012247 Clacu07g0092 Clacu-Chr7:1336078 3.30E-232 wgd
Clacu06g0701 Clacu-Chr6:8185682 Clacu07g0092 Clacu-Chr7:1336078 3.80E-236 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0092 K08176 - mtr:25499257 899.427