Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0225 ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCCCCAGATGGGTTGCTGGAATTTGTTGAACGAGTATATATTTTTGATTCGTGCTTTTCAACTGAAGTATTGCCCGATGGTATGTACCAAATATATCTGCACGAAATCATAAACGAATTACATGAAGAATTCCCGGATTCCTCCTTTCTTGCATTTAATTTTCGTGAAGGGGAGAATAGGAGCCAATTTTCAGAAATGTTGTGCGAGTATGATGTCACTGTGATGGATTATCCTCGACAATACGAAGGTTGCCCTCTTCTTCCATTGTCGTTGATACAGCATTTCCTCCGTGTCTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTCATTCTTCTCCACTGTGAGAGGGGAGGTTGGCCACTCTTAGCATTCCTTTTGGCTAGCTTTTTGATATTTAGAAAAATGCAAAGTGGTGAGCGGAAAACTCTTGAAATTGTACATCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCACCATTAAATCCATTTCCATCTCAGCTCCGCTACTTGCAGTATGTTGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCATTCCGGGTTTTGATTCTCAGAATGGTTGCAGACCGGTCATTCGCATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTCTCCACGCAGATGCTTTTCTCTATGCCTAAGAAGAACAAGCCCCTCCGTCACTACCGTCAGGCAGACTGTGATGTGATTAAAATAGACGTGCAGTGTTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTTAATACAGCATTTATTCGATCAAACATACTGATGCTAACCTCTGAAAATTTGGACATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCCGAGGTTTTGTTTGGGGAGATGGAAAGCATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTACCAATTGAAGCATTTTCCAAGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAGCAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATACTCCTCACCAGTGGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTCTTTGATATGATTACAAAGCCTTTTGTTGATTCAACTAATATCAACTTTACAAATCCGGCCATGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGAATTTCAAGACAAGATATTTTCAAATAAAGAACCTCTACCCTCTTCATCACCTCCACTAACTTCTTTTGGCTCCCCAGCCCTTCCTACAAGTTCTTCAATGTCATCGCCACTGTTGCCTCCATCTAATCTACCATCTGCCAATGCTAGTGGGGAACTTGTCTCAAATAGAATGGCACCCACTGTTAAAGCGATTCCTCCACCACCGCCGCCACCACCTTTTTCTCTATTACATAATAAACCTCATGTAGAAACTTCCTTTGGTTCAGATTTGACCACTGTGACAATGCATGGGAGACCCCCTCCACCCCCTCCACCTCCACCTCAATATCCTACTAGTAACAATTCTATTACAGCCTCTACTCATTCACTTTCTCATGTTCCTAAATCGTCTGATACTCCTCCACCCCCACCTCCACCTCCTCCTTTTGTTCCAAAATCTTCTAGTGCTCCCCCGCCTCCGCCCCTGGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCCGTAGTTCCAAAATCTTTTGGTGCTCCCCCACCTCCACCTCCACCTCCACCTCCACCTATAGTTCCAAAATCTTTTGGTGCTCCTCCACCTCCGCCTCCACCTCCACCTATAGTTCCAAAATCTTCTATTGCTCCTCCACCTCCGCCTCCACCTCCAGTTTCAAAATCTTCTAATGCTCCTCCACCTCCTCCTCCTCCACCTCCATTTCTAAAGTCATCTAATGCTCTTCCATCTCCGCCTCTGCCTCCGCCTCCACCTCCGCTTCTAAAATCATCCAGTGCTCCTCCACCTCCACCTCCGCCTCCACCTTCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCAAAATCTTCTAGTGCTCTGCCACCTCCACCTCCACCTCCACCTCCACCTTCAATTCCAAAGCTTTCTGGTGCTTCACCTCCACCTCCTCTTCCACAATCAAATCGTGGTGCACCAGCTCCACCTCCTCCACCACCAAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAAGTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCTCATCCTCCGACGAGCCATGGTGCTACACCAATGCCACCCCCTCCCCCCGGGTCAAGAGGATCAAATGTACCACCACCTCCTCCTCCTTCTGGACGAGGCAAAGCTTCCCTAGGATCAACAACTCAAGGAAGAGGCCGAGTTGCTACAGGAGTTGTAAATGCTCCAAAAAAAACCACTTTAAAACCATTACACTGGGTAAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCGAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCAGCCTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGACGACGTGGTTCCAGCATCAACAAACCTGAAAAAGTGCAACTGATTGACCTGCGGAGAGCATATAACTGTGAAATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGAGTTATACAGGTGACAGAGAAATGCTTGGAAAGTGTGAGCAGTTTTTTCTCGAGCTAATGAAGGTCCCACGGATAGAGCCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAACACAATAAATGATGCTACAAGAGAGGTCAAAGAATCCGCAAAATTGCGTCAGATAATGCAAACGATTCTTACACTGGGAAATGCGTTAAACCAGGGTACTGCTCGAGGCTCAGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATTTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTCGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCTGAGGAAATGCAAGCAGTGAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACCGCTTCAGAAAATGATGGTGCCATCTCTGCTGGTTTCCAGAAGGTGCTGAAGAATTTTCTTGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCTTTATATTCTGAAGTGGGGAGAAATGCTGATTCACTATCCCAGTACTTTGGCGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTTACTCAAATTTTAATAGTCTTCGTTAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCCGATGCTGATAAGAGAAAAACAGAGAAGGAAGCCATGAAAGAACGAAGTTCGGTTAAAGCAAAGTTTGAATGTGAATATCAGATTTGTGATTCATGGACTTCCATCAAGGTTGGCTATTTGCCTTCCTGTACAGCCATTTCTTTCATCAATATCGTGGCTTGTAAATACGATGTGACGCAATTACAGGCTCGGGGAGTGGTTGCCATTTGA 4053 44.41 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEVLPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGENRSQFSEMLCEYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMQSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGIPGFDSQNGCRPVIRIFGRNLFSKGGLSTQMLFSMPKKNKPLRHYRQADCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMESISPPRAPTSILNGEEKGGLPIEAFSKVQELFSGVEWIDSNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPVDSEEENNTSSTADSSDEVFDMITKPFVDSTNINFTNPAMVHSSELLSDKIGANEVNISSESPQSSDEFQDKIFSNKEPLPSSSPPLTSFGSPALPTSSSMSSPLLPPSNLPSANASGELVSNRMAPTVKAIPPPPPPPPFSLLHNKPHVETSFGSDLTTVTMHGRPPPPPPPPPQYPTSNNSITASTHSLSHVPKSSDTPPPPPPPPPFVPKSSSAPPPPPLVPKSFGAPPPPPPPPPVVPKSFGAPPPPPPPPPPPIVPKSFGAPPPPPPPPPIVPKSSIAPPPPPPPPVSKSSNAPPPPPPPPPFLKSSNALPSPPLPPPPPPLLKSSSAPPPPPPPPPSKSSSALPPPPPPPPPKSSSALPPPPPPPPPPSIPKLSGASPPPPLPQSNRGAPAPPPPPPKPPSVELPSHGAKSSRPPPPPPPAKPFNAHPPTSHGATPMPPPPPGSRGSNVPPPPPPSGRGKASLGSTTQGRGRVATGVVNAPKKTTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSSINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKSYTGDREMLGKCEQFFLELMKVPRIEPKLRVFAFKITFSSQVNDLRYHLNTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISAGFQKVLKNFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADADKRKTEKEAMKERSSVKAKFECEYQICDSWTSIKVGYLPSCTAISFINIVACKYDVTQLQARGVVAI 1350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2651977 2663003 + ClG42_07g0022500.10 Clacu07g0225 252823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0225 1350 Gene3D Formin, FH2 domain 898 1282 IPR042201 -
Clacu07g0225 1350 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 489 901 - -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 594 610 - -
Clacu07g0225 1350 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 830 878 - -
Clacu07g0225 1350 Pfam C2 domain of PTEN tumour-suppressor protein 198 338 IPR014020 -
Clacu07g0225 1350 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Clacu07g0225 1350 SUPERFAMILY Formin homology 2 domain (FH2 domain) 909 1289 - -
Clacu07g0225 1350 SMART PTEN_C2_2 198 338 IPR014020 -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 489 536 - -
Clacu07g0225 1350 Gene3D - 197 342 - -
Clacu07g0225 1350 FunFam Formin-like protein 895 1282 - -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 406 431 - -
Clacu07g0225 1350 Pfam Formin Homology 2 Domain 901 1271 IPR015425 -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 578 593 - -
Clacu07g0225 1350 ProSiteProfiles Formin homology-2 (FH2) domain profile. 896 1296 IPR015425 -
Clacu07g0225 1350 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 950 969 - -
Clacu07g0225 1350 Coils Coil 1177 1204 - -
Clacu07g0225 1350 SMART it6_source 515 1331 IPR015425 -
Clacu07g0225 1350 PANTHER FORMIN-J 797 1294 IPR051144 -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 611 823 - -
Clacu07g0225 1350 MobiDBLite consensus disorder prediction 543 558 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1785 Clacu-Chr5:26968209 Clacu07g0225 Clacu-Chr7:2651977 1.40E-240 dispersed
Clacu06g1702 Clacu-Chr6:27698462 Clacu07g0225 Clacu-Chr7:2651977 8.00E-203 dispersed
Clacu07g0225 Clacu-Chr7:2651977 Clacu06g1324 Clacu-Chr6:24173019 7.50E-249 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0225 K28090 - csv:101217517 1048.5