Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu07g0239 | ATGACCACCGGAAGGGAAATTCTCCACAAGATGAAGGTGAAGGCAGGGTTTTGTTCATCAGCAGCAGCTGATACAGGGAAAGGCAAAGGCAAATTGACGACAAATAATAATAATAATAATAATAAGAATATAAGCCATGGGAGTTATTTGGTGAAGGGAAAAGGCAACCATCCAATGGAAGATTACTTGGTTTCCGATTTCAAGCGAGTCAAAGAACATGATTTGGGTTTGTTTGCCATTTTCGATGGCCATTTGGGCCACGATGTTGCTAATTTCTTGCAAAATAATCTCTTTCATAACATCCTCAAAGAGGCTGATTTCTGGGGCGAAACAAGAAAAGCCATAAAAAGAGCTTACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGCAACTTGGAAAAGGAGGATCAACGGCCGTAACCGCGATCTTGATCGACGGCCACAAACTTGTGGTTGCCAACGTCGGAGATTCTAGAGCTGTTTTGTGCAGAAACGGCGTCGCCGAGCAACTTTCCGTTGACCACGAACCCACCAAAGAGAAAAGAGAAATTGAAAGCCGTGGTGGTTTTGTATCAAATATTCCAGGAGATGTTCCACGTGTCGACGGACAATTGGCGGTGGCCAGAGCATTTGGAGATAAGAGTTTAAAAGTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGACGAAACTACAGAGTTCATGATTTTGGCTAGCGATGGCATATGGAAGGTGATGACAAACCAAGAAGCAGTAGAATCAATTAGACATATAAAGGATGCGAACATAGCGGCCAGACGACTTATCGACGAAGCAGTGTCTAGAAAAAGCAAGGACGACATATCGTGCATTGTTGTTAGGTTTCGATGA | 882 | 43.31 | MTTGREILHKMKVKAGFCSSAAADTGKGKGKLTTNNNNNNNKNISHGSYLVKGKGNHPMEDYLVSDFKRVKEHDLGLFAIFDGHLGHDVANFLQNNLFHNILKEADFWGETRKAIKRAYKKTDEEILDKVKQLGKGGSTAVTAILIDGHKLVVANVGDSRAVLCRNGVAEQLSVDHEPTKEKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKVHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNQEAVESIRHIKDANIAARRLIDEAVSRKSKDDISCIVVRFR | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 2805238 | 2808547 | + | ClG42_07g0023900.10 | Clacu07g0239 | 252837 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu07g0239 | 293 | FunFam | Probable protein phosphatase 2C 39 | 36 | 293 | - | - | |
Clacu07g0239 | 293 | MobiDBLite | consensus disorder prediction | 29 | 45 | - | - | |
Clacu07g0239 | 293 | Gene3D | - | 27 | 293 | IPR036457 | - | |
Clacu07g0239 | 293 | SMART | PP2C_SIG_2 | 50 | 292 | IPR001932 | - | |
Clacu07g0239 | 293 | CDD | PP2Cc | 44 | 292 | IPR001932 | - | |
Clacu07g0239 | 293 | MobiDBLite | consensus disorder prediction | 24 | 45 | - | - | |
Clacu07g0239 | 293 | ProSiteProfiles | PPM-type phosphatase domain profile. | 45 | 292 | IPR001932 | - | |
Clacu07g0239 | 293 | SMART | PP2C_4 | 40 | 290 | IPR001932 | - | |
Clacu07g0239 | 293 | Pfam | Protein phosphatase 2C | 57 | 285 | IPR001932 | - | |
Clacu07g0239 | 293 | PANTHER | PROTEIN PHOSPHATASE | 40 | 290 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Clacu07g0239 | 293 | SUPERFAMILY | PP2C-like | 38 | 292 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu07g0239 | Clacu-Chr7:2805238 | Clacu11g1596 | Clacu-Chr11:27124233 | 2.10E-87 | dispersed | |
Clacu01g2600 | Clacu-Chr1:36262009 | Clacu07g0239 | Clacu-Chr7:2805238 | 3.60E-85 | transposed | |
Clacu03g0064 | Clacu-Chr3:801336 | Clacu07g0239 | Clacu-Chr7:2805238 | 1.60E-37 | transposed | |
Clacu06g0717 | Clacu-Chr6:8379695 | Clacu07g0239 | Clacu-Chr7:2805238 | 7.00E-29 | transposed | |
Clacu08g0784 | Clacu-Chr8:17866112 | Clacu07g0239 | Clacu-Chr7:2805238 | 4.00E-46 | transposed | |
Clacu08g1921 | Clacu-Chr8:28318448 | Clacu07g0239 | Clacu-Chr7:2805238 | 3.60E-31 | transposed | |
Clacu11g1978 | Clacu-Chr11:30743185 | Clacu07g0239 | Clacu-Chr7:2805238 | 1.00E-99 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu07g0239 | K17506 | - | csv:101211399 | 501.516 |