Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0305 ATGGAGAGTTTTGTAAGGTTTTTGGGTTCGGCAAAACCGTATTTTGGAGTGATTTTTATACAGTTTGGTTATGCTGGAATGACGATTCTTACAAAATCAGCTTTAAACAAAGGGATGAGCCAATATATTTTTGTGGTTTATCGTCAAGTTGCTGCTACTCTTGTCATGGCTCCTTTTGCCATTATCTTTGATAGGAAGGCGAGGACAAAGATGTCCTTTTCATTGTTCTTCAAGATTTTGATTCTGGGTTTCTTAGAGCCAGTAATTGATCAAAACTTATTCTATACTGGTATGAAGTACACAACAGCAACTTTTGCATCGGCCATGTGCAATGTTCTTCCAGCTTTTGTTTTCCTCATGGCTTGGGCTTGCAGGCTTGAGAAAGTGAATATTTTGAAAAGGGGAAGCCAAGCAAAAATCCTAGGAACCATAGTAACAGTAGGAGGAGCCATGATTATGACCTTCATAAAAGGGCCAATGTTGAATTTACCATGGACAAAATTACCCAATCACCCCTCTGCTTCTTCTTCATCAGCTTCTTCTCCAAATCACCAAAGCACAATCATGGGCTTCCTCATGATTGCAACTGGCTGCATTTGCTGGTCAGCTTTCATCATTCTTCAGGCGATTACGTTGAAATCGTACCCGGCCGAGCTATCGCTTACAGCATTGATATGCTTGGTTGGCACCATTGGAGGCTCTGGGTTTGCTTTGATCATGGAGAGGGGGAACCCTTCTGCTTGGGCTTTGCACTTTGACAGCCAGCTTCTAGCTGTGGTTTATTCTGGTGTAATATGTTCAGGGGTAACTTATTATATTCAAGGAGTGGTGATGCAAACAAAAGGGCCTGTTTTTTTCTCTGCATTCAATCCTCTGTCCATGATTCTTGTTGCAATCATGAGCTCCTTCATCTTGTCTGAGATTATGTTGTTGGGAAGGATTGTTGGAGCAGTGGTCATAATCATTGGCTTGTACCTTGTTTTGTGGGGGAAAACCAAAGATCAGCCTTCAATACTTAAATCAGAATGTGATAAGATAACACCTTGTGAGCAACAAATGATCACTGCAAATGATGAGGCTTCCAAGATGACGATGGCGGTTCGATCGAGTCAAGAATTCGTCGCGCTTGATGTTGAAAAAGAGGAGAGAAATTGA 1155 41.65 MESFVRFLGSAKPYFGVIFIQFGYAGMTILTKSALNKGMSQYIFVVYRQVAATLVMAPFAIIFDRKARTKMSFSLFFKILILGFLEPVIDQNLFYTGMKYTTATFASAMCNVLPAFVFLMAWACRLEKVNILKRGSQAKILGTIVTVGGAMIMTFIKGPMLNLPWTKLPNHPSASSSSASSPNHQSTIMGFLMIATGCICWSAFIILQAITLKSYPAELSLTALICLVGTIGGSGFALIMERGNPSAWALHFDSQLLAVVYSGVICSGVTYYIQGVVMQTKGPVFFSAFNPLSMILVAIMSSFILSEIMLLGRIVGAVVIIIGLYLVLWGKTKDQPSILKSECDKITPCEQQMITANDEASKMTMAVRSSQEFVALDVEKEERN 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3417540 3423477 - ClG42_07g0030500.10 Clacu07g0305 252903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0305 384 Pfam EamA-like transporter family 14 153 IPR000620 GO:0016020(InterPro)
Clacu07g0305 384 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020(InterPro)
Clacu07g0305 384 PANTHER WAT1-RELATED PROTEIN 18 347 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Clacu07g0305 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 155 - -
Clacu07g0305 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0890 Clacu-Chr4:23251766 Clacu07g0305 Clacu-Chr7:3417540 2.30E-110 dispersed
Clacu07g0305 Clacu-Chr7:3417540 Clacu09g2041 Clacu-Chr9:35246459 1.10E-109 dispersed
Clacu07g0304 Clacu-Chr7:3379851 Clacu07g0305 Clacu-Chr7:3417540 1.40E-149 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0305 - - - 0.0