Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu07g0337 | ATGACAGGCCTTAACTCTTCTAATTTCTCTTCTTCTTCTTGTGGTGCCTGCAAGTTTCTTAGGAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTACGATGAAGCCACTTCCCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCCAAGCTTCTCTTACATCTCCCCATTCATATCCGAAGCCACGCTGCCCTTACGGTCGCTTATGAAGCGCTCGAGCGCATGCGAGATCCTACCTATGGTTGCGTTGCGCATATTTTCGCATTGCAGCAAGAGGTTGCGAGCTTGCAAGAGGAGATAGAAATTCTGGGGAGCCAAATAGCAAACTTCACTGCTACCGGTGGGAGCGTTGCGGGGGTTGAGAATCCATTTATAGATCAGCTTCAAGTTTCACAACAGCTGAAAGATTTTGGGATGATGAACAGAGATGATTATCAAAATGAGCTGCTTTCTGAGTTGCCCTACCAAAGTTTTGATAACATCCAAAATGATAATAATGGTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGGGTTTTGCAGCTCAAATGATGTTGTTGAGAGATCAGCCTGTGATGTTTCATTTGAGGAGAGTTTTGTTGGTTATCCATGGGTAGTTGGATGA | 663 | 42.84 | MTGLNSSNFSSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPIHIRSHAALTVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFTATGGSVAGVENPFIDQLQVSQQLKDFGMMNRDDYQNELLSELPYQSFDNIQNDNNGQMISPLFCLGEEDGVFGFCSSNDVVERSACDVSFEESFVGYPWVVG | 220 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 3837492 | 3838430 | + | ClG42_07g0033700.10 | Clacu07g0337 | 252935 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu07g0337 | 220 | ProSiteProfiles | LOB domain profile. | 12 | 114 | IPR004883 | - | |
Clacu07g0337 | 220 | Coils | Coil | 93 | 120 | - | - | |
Clacu07g0337 | 220 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 11 | 132 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Clacu07g0337 | 220 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 109 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu07g0337 | Clacu-Chr7:3837492 | Clacu09g0797 | Clacu-Chr9:7180340 | 2.50E-32 | dispersed | |
Clacu07g0337 | Clacu-Chr7:3837492 | Clacu06g0035 | Clacu-Chr6:567627 | 1.10E-35 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
47996 | PF03195 | LOB | 8.90E-33 | No_clan | Clacu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu07g0337 | K13945 | - | csv:101204875 | 375.941 |