Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0354 ATGGGGAGCAAGCTAGAGGACCCTGATTCCACTCATCTACAGCATAGGTCGATGTTGGAACAAGTCGTTGGCAGCACGTTTACTCCAGAATCTGTAGTCTACACATACAAGAGAAGTTTCAATGGATTTGCTGTAAAACTCACCGAAGAAGAAGCTGAAAAGATTGCCAGTATGAAGGGTGTGGTGTCTGTGTTTCTAAATGAAAAGAACCAACTTCAAACGACAAGATCATGGGATTTTCTGGGTTTTCCACAAAATGTTCGTCGTGTAAATCAAGTGGAAAGTAGCATTGTTGTTGGAGTTTTGGACCACGGAATCTGGCCAGAGTCTCCCAGTTTCAAAGATGAAAATCTTGGTCCCATACCACCCAGATGGAAGGGCACCTGTGACAAAGCATTCAACTTTACTTGCAACAGAAAAATTATTGGAGCCCGAGCATATCGCATCGGGCGTCCTATTCCCCCTGGTGATGTGGATAGTCCAAGAGATACAGACGACCATGGAACACACACTGCATCAACAGTGGCCGGTGGTCTAGTGAGGCAGGCAAGTTTGTACGGTCTCGGGCTTGGCACGGCGAGAGGAGGTGTTCCGTCCGCGCGCATCGCTATATACAAGATATGTTGGAAGGATGGTTTCTTCGATGCGGACATTCTTGCAGCATATGACGATGCCATTGCCGATGGAGTCGATATTATATCTCTTTCAGTGAATGCGAAGGAAGTGCGGCCTTATTTCAAAGATCCCATTGCCATTGGATCTTTTCAAGCAATGAAAAATGGAATATTAACATCCAATTCTGCTGGAAATTCAGGTCCGAAACTCTTCACCACCACAAGCTTGTCTCCATGGCTTCTTTCTGTTGCTGCAAGTACCATCGACAGGAAGTTTGTTACACAAGTGCAAATTGGCAATGGAAATAGCTTTCAGGTTCGAATTCAGCCCGACCCCAAGCCCAAACACAACGGGCTTAAGTACTATTTAGGCTGGAGTGACATGAGGAAGAGTAAACCCTATAGTGACATAGTTGTTCTTCTAATCGACTACAACTCATCATAA 1059 45.23 MGSKLEDPDSTHLQHRSMLEQVVGSTFTPESVVYTYKRSFNGFAVKLTEEEAEKIASMKGVVSVFLNEKNQLQTTRSWDFLGFPQNVRRVNQVESSIVVGVLDHGIWPESPSFKDENLGPIPPRWKGTCDKAFNFTCNRKIIGARAYRIGRPIPPGDVDSPRDTDDHGTHTASTVAGGLVRQASLYGLGLGTARGGVPSARIAIYKICWKDGFFDADILAAYDDAIADGVDIISLSVNAKEVRPYFKDPIAIGSFQAMKNGILTSNSAGNSGPKLFTTTSLSPWLLSVAASTIDRKFVTQVQIGNGNSFQVRIQPDPKPKHNGLKYYLGWSDMRKSKPYSDIVVLLIDYNSS 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4079341 4085772 + ClG42_07g0035400.10 Clacu07g0354 252952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0354 352 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 73 IPR037045 -
Clacu07g0354 352 Gene3D Peptidase S8/S53 domain 97 293 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0354 352 ProSiteProfiles Serine proteases, subtilase domain profile. 77 352 - -
Clacu07g0354 352 CDD Peptidases_S8_3 71 293 IPR034197 -
Clacu07g0354 352 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 310 IPR045051 -
Clacu07g0354 352 SUPERFAMILY Subtilisin-like 72 315 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0354 352 MobiDBLite consensus disorder prediction 153 172 - -
Clacu07g0354 352 Pfam Subtilase family 96 292 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu07g0354 352 Pfam Peptidase inhibitor I9 4 72 IPR010259 -
Clacu07g0354 352 Gene3D - 294 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0354 Clacu-Chr7:4079341 Clacu07g0357 Clacu-Chr7:4102281 4.40E-140 dispersed
Clacu07g0353 Clacu-Chr7:4066751 Clacu07g0354 Clacu-Chr7:4079341 5.30E-64 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0354 - - - 0.0