Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0359 ATGCAGGTGTATGTTGTGTACATGGGAAAACCATCTGAAGGAGATTTCTTAGCTATGTCTGAACAGCACACCAACATGCTTCAACAAGTTCTTACGACAAGTGAAGCATCAAAATCTTTGGTGTATAGCTACCATCGGAGCTTCAATGGCTTTGCAGCGAGGCTCAACGAGGAGGAGGCTCGAATACTCGCCGCAATGAATGAAGTTGTGTCTGTGTTTCCTAGTGAGAAGAAACAACTTCATACCACAAGATCATGGGATTTCATGGGTCTATTCCAACAAACTCGAAGAGCCAACTTAGAGTCCGATTTGATTATCGGAATGTTGGATACTGGGATTTGGCCGGAATCTCAAAGCTTTTCCGATGAAGGCTTTGGCCCACCGCCGCTTAGATGGAAAGGAGAATGCCAGCCCTTTTCTAATTTCACCTGCAATAATAAAATAATCGGAGCTCGATTCTTCCGGAGCGAGCCTCTCGCCGGAGCCGATATTCTTTCTCCGAGAGATACAGAAGGCCATGGAACCCACACTTCATCCACTGCCGCCGGTAATTTTGTATCCGGCGCCAGCCTCTCGGGCCTCGCCGTCGGCACCGCTCGGGGAGGCGTTCCCTCCGCTCGCATCGCCGTCTACAAGATCTGCTGGTCCGATGGTTGCTTTGATGCTGACATCCTCGCAGCTTTCGACAGTGCAATCGCTGATGGCGTCGACATCATCTCCATTTCCGTCGGAGGTTTTATCGCCAAGAATTACTTCAACGATTCAATCGCTATTGGGGCTTTTCACGCAATGAAGAACGGTATTCTGACTTCAAATTCCGGAGGCAATTCTGGCCCTAGCCTTGGTAGTATCACGAATGTTTCTCCATGGTCGTTATCGGTGGCTGCTAGCACCATCGATAGGAAGTTTGTGACTAATGTGAAGTTGGGTAATGGAGAATCCACTCAGGGGATCTCTGTGAACACCTTCCAACTTGGAGATGAGTTTTTTCCGCTTATATATGCTGGTGATGCTCCTAATAGAACTGCAGGTTTCAATGAATCATTATCAAGGTTCTGCCTCCCAGGTTCTTTGGACGTGGACAAAGTTCAGGGGAAGATTGTTTTATGCGATGAGGTTGGTGATGGAGAACCAGCTTTGAGTGGTGGTGCGGTTGGTACAATAATGCAAGTTGCTGGCCACCAAGATGTTGCCTTTCTTTTCCCCCTACCTGTTTCCTTGATAGACTTGGACGCTGGAAAGAATGTTTTCCAGTACCTGAGATCAACCAGCAATCCGGTGGCTACCATAGGAAAGAGTACTACCATTGAGGATCTGTCAGCTCCTTCTGTAGTTTCCTTCTCATCAAGGGGTCCTAATATAGTTACACCGGACATTCTCAAGCCTGATTTGGCCGCACCAGGAGTGGATATACTAGCATCTTGGTCTGAAGGCACAACAATCACAGGTTTAGAAGGGGATAACCGAATAGCTCCATTTAACATAATCTCTGGCACATCCATGGCTTGCCCACATGCAACAGGAGCAGCTGCCTATGTGAAATCCTTCCATCCAACTTGGTCTCCAGCTGCTATCAAGTCGGCACTTATGACAACTGCTTTTCCCATGACTCCAAAGTTAAACACAGATGCTGAGTTTGCATATGGAGCAGGTCACGTAAATCCAGTAAATGCCATTAACCCCGGTTTAGTCTATGATGCTGAAGAGCTTGACTACATAAAGTTCTTATGTGGGCAAGGATATAGTACTGCTAATCTTCGTCTTGTTACTAGTGACCAGAGCAACTGTTCGGGTGTTACAAAGACAGCTGCATCGGATCTAAACTATCCATCTTTTGCTCTAGTGATCAATTCTCCAAGTCGAAGATTGATTCGTCGTGTATACCACAGGACTGTCACAAATGTTGGGCTGCCAGTGTCGACTTATAAAGCAGTTATTCAAACTCCGCCCGGGCTCAAAGTTACAGTACGTCCTGCTACTCTTTCTTTCCGTTCTCTTGGACAAAAGGTATCCTTCACTGTGATTGTGAGAGCTAAAGCAGAAGTTGGTGGAAAGATGCTTTCTGGCAGCTTAACCTGGGATGATGGAGTGCATCTGTTATCATTCTTGCCTTTGAATCTTATCCCTGAATCTGAATCTGAATACCTTCATGTTCATCCGATCACCACAGCCACCAAAAAATTCTCTCCGAATTTAGCACAACTCTCCCCAATCACAAAACTCACAGATACTCAGAAGTCAAAACAATAA 2250 46.27 MQVYVVYMGKPSEGDFLAMSEQHTNMLQQVLTTSEASKSLVYSYHRSFNGFAARLNEEEARILAAMNEVVSVFPSEKKQLHTTRSWDFMGLFQQTRRANLESDLIIGMLDTGIWPESQSFSDEGFGPPPLRWKGECQPFSNFTCNNKIIGARFFRSEPLAGADILSPRDTEGHGTHTSSTAAGNFVSGASLSGLAVGTARGGVPSARIAVYKICWSDGCFDADILAAFDSAIADGVDIISISVGGFIAKNYFNDSIAIGAFHAMKNGILTSNSGGNSGPSLGSITNVSPWSLSVAASTIDRKFVTNVKLGNGESTQGISVNTFQLGDEFFPLIYAGDAPNRTAGFNESLSRFCLPGSLDVDKVQGKIVLCDEVGDGEPALSGGAVGTIMQVAGHQDVAFLFPLPVSLIDLDAGKNVFQYLRSTSNPVATIGKSTTIEDLSAPSVVSFSSRGPNIVTPDILKPDLAAPGVDILASWSEGTTITGLEGDNRIAPFNIISGTSMACPHATGAAAYVKSFHPTWSPAAIKSALMTTAFPMTPKLNTDAEFAYGAGHVNPVNAINPGLVYDAEELDYIKFLCGQGYSTANLRLVTSDQSNCSGVTKTAASDLNYPSFALVINSPSRRLIRRVYHRTVTNVGLPVSTYKAVIQTPPGLKVTVRPATLSFRSLGQKVSFTVIVRAKAEVGGKMLSGSLTWDDGVHLLSFLPLNLIPESESEYLHVHPITTATKKFSPNLAQLSPITKLTDTQKSKQ 749
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4145780 4154934 + ClG42_07g0035900.10 Clacu07g0359 252957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0359 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 695 IPR045051 -
Clacu07g0359 749 SUPERFAMILY Subtilisin-like 80 563 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0359 749 CDD PA_subtilisin_like 306 430 - -
Clacu07g0359 749 Gene3D - 300 437 - -
Clacu07g0359 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 81 IPR037045 -
Clacu07g0359 749 Pfam Peptidase inhibitor I9 3 81 IPR010259 -
Clacu07g0359 749 CDD Peptidases_S8_3 78 533 IPR034197 -
Clacu07g0359 749 ProSitePatterns Serine proteases, subtilase family, serine active site. 498 508 IPR023828 -
Clacu07g0359 749 Pfam Fibronectin type-III domain 606 699 IPR041469 -
Clacu07g0359 749 PRINTS Subtilisin serine protease family (S8) signature 101 120 IPR015500 -
Clacu07g0359 749 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Clacu07g0359 749 PRINTS Subtilisin serine protease family (S8) signature 497 513 IPR015500 -
Clacu07g0359 749 FunFam Subtilisin-like protease SBT1.5 103 322 - -
Clacu07g0359 749 Gene3D - 576 703 - -
Clacu07g0359 749 Gene3D Peptidase S8/S53 domain 103 572 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0359 749 ProSiteProfiles Serine proteases, subtilase domain profile. 85 559 - -
Clacu07g0359 749 Pfam Subtilase family 103 551 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu07g0359 749 FunFam Subtilisin-like protease SBT5.3 1 81 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0357 Clacu-Chr7:4102281 Clacu07g0359 Clacu-Chr7:4145780 6.30E-213 dispersed
Clacu07g0359 Clacu-Chr7:4145780 Clacu07g0652 Clacu-Chr7:11695233 5.20E-191 dispersed
Clacu07g0358 Clacu-Chr7:4132170 Clacu07g0359 Clacu-Chr7:4145780 1.00E-226 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0359 - - - 0.0