Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu07g0403 | ATGGAAGGGAAGGAAGAAGATGTAAGACTTGGAGCTAACAAGTTCACCGAGAGACAGCCAATTGGAACGGCGGCGCAGAGTCAAGATGACGGCAAGGACTACAAGGAGCCACCGCCGGCGCCGTTGTTCGAGCCGGAGGAGCTCACTTCATGGTCCTTTTACAGAGCTGGAATTGCAGAGTTTTTCGCCACTTTCCTCTTCCTTTACATCACCGTTTTGACCGTCATGGGTGTCGTCCGGTCCAACGAAGCCAACGGCAACACCTGTAAGACCGTCGGGATTCAGGGGATTGCTTGGGCTTTCGGCGGTATGATTTTCGCTCTGGTTTACTGTACTGCTGGAATTTCCGGTGGACACATTAACCCGGCGGTGACTTTCGGGCTGTTTTTGGCGAGAAAGTTGTCGTTGACCAGGGCGATTTTCTACATAGTGATGCAGTGCCTTGGTGCCATCTGCGGCGCCGGCGTGGTGAAGGGGTTCCAACCCAAGCCCTACGACAGGCTCGGTGGTGGAGCTAACGTTGTGAACAGTGGATACACCAAAGGAGATGGGCTCGGCGCTGAGATCGTCGGCACATTCATCCTTGTTTACACCGTCTTCTCCGCCACTGACGCCAAACGTAGTGCCAGAGACTCACATGTTCCGATTTTGGCACCGTTGCCAATTGGGTTTGCAGTGTTCTTAGTTCACTTGGCCACCATTCCGATCACCGGCACCGGCATCAACCCAGCCCGGAGCTTGGGAGCTGCCATTATTTTCAACCACGACAAAGCCTGGGATCATCACTGGATTTTCTGGGTGGGACCATTCATCGGCGCTGCTCTTGCAGCTCTTTACCACCAAGTTGTGATCAGAGCCATCCCTTTCAAGTCCAAGTGA | 879 | 53.81 | MEGKEEDVRLGANKFTERQPIGTAAQSQDDGKDYKEPPPAPLFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVVRSNEANGNTCKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYDRLGGGANVVNSGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNHDKAWDHHWIFWVGPFIGAALAALYHQVVIRAIPFKSK | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4619390 | 4620988 | - | ClG42_07g0040300.10 | Clacu07g0403 | 253001 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu07g0403 | 292 | Gene3D | Glycerol uptake facilitator protein. | 40 | 291 | IPR023271 | - | |
Clacu07g0403 | 292 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | PRINTS | Major intrinsic protein family signature | 223 | 245 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | PRINTS | Major intrinsic protein family signature | 263 | 283 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | PRINTS | Major intrinsic protein family signature | 101 | 125 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | PRINTS | Major intrinsic protein family signature | 138 | 157 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | PRINTS | Major intrinsic protein family signature | 187 | 205 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | SUPERFAMILY | Aquaporin-like | 46 | 285 | IPR023271 | - | |
Clacu07g0403 | 292 | CDD | MIP | 55 | 283 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | FunFam | Probable aquaporin PIP1-2 | 40 | 292 | - | - | |
Clacu07g0403 | 292 | ProSitePatterns | MIP family signature. | 119 | 127 | IPR022357 | - | |
Clacu07g0403 | 292 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 291 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Clacu07g0403 | 292 | Pfam | Major intrinsic protein | 47 | 280 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | NCBIfam | MIP family channel protein | 59 | 280 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Clacu07g0403 | 292 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu05g2291 | Clacu-Chr5:31293989 | Clacu07g0403 | Clacu-Chr7:4619390 | 2.40E-108 | dispersed | |
Clacu07g0403 | Clacu-Chr7:4619390 | Clacu07g0406 | Clacu-Chr7:4632940 | 1.90E-165 | dispersed | |
Clacu07g0403 | Clacu-Chr7:4619390 | Clacu07g0405 | Clacu-Chr7:4625997 | 1.90E-165 | proximal | |
Clacu01g0259 | Clacu-Chr1:2530915 | Clacu07g0403 | Clacu-Chr7:4619390 | 1.80E-139 | transposed | |
Clacu02g1182 | Clacu-Chr2:23728701 | Clacu07g0403 | Clacu-Chr7:4619390 | 7.30E-17 | transposed | |
Clacu10g2158 | Clacu-Chr10:34732346 | Clacu07g0403 | Clacu-Chr7:4619390 | 3.80E-126 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu07g0403 | K09872 | - | csv:101215145 | 565.459 |