Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu07g0414 | ATGGCTTTTTTCTCCTTCTTCTTCTTCCTCTTTTCCTCTGTTTTAGCTTCTTCTCTGTTTTTTCTCTTCCTCCGCCCCACCAGATTCCGCCGTGTGCGGCTGCCGCCGGGGACACTCGGCCTTCCCTTGATCGGGGAGACCCTTCAGCTCATCTCCGCCTACAAGACCGAGAACCCTGAACCCTTCATCGACGAGCGGGTGCGTAGATTTGGACCGGTTTTTACCACCCATTTGTTCGGTGAGCCGACGGTTTTCTCAGCCGATTGGGAAACCAACCGGTTCATTCTTCAGAATGAGGAGAAGCTTTTTGAGTGTAGTTACCCCGGTTCCATTTCTAACCTACTTGGAAGGCATTCTTTGTTGCTTATGAAAGGGAGTTTACATAAAAGAATGCATTCTTTGACTATGAGCTTTGGGAACTCTTCCATTATTAGAGACCATCTTTTGGTCGACGTCGACCGCTTGATTCGGCTTAATTTGAACTCTTGGACCGGCCGGATCTTCCTCATGGAAGAAGCTAAAAAGATAACATTTGAGTTAGCAGTGAAGCAATTGATGAGCTTTGATCGTTGCGAATGGACTCAAAATCTCATGAAAGAATATCTTCTTGTGATTGAAGGATTTTTTACCGTCCCTCTCCCTCTCTTCTCATCTACTTACCGTCGAGCCATCCAGGCACGGAGGAAGGTGGCGGAGCAATTGGGGACAGTGGTGCGGGAGCGGAGGAAAGAGAGCGAGAATGGAGCGAGGAAGAAGGACATGCTCGGAGCACTGCTCGCCGGAGAAGATGCCCTCTCCGACGAGCAAATAGTAGATTTCTTACTGGCTTTATTGGTGGCGGGATATGAAACGACGTCAACTACCATGACGCTCGCCGTTAAGTTTCTGACGGAGACGCCGCTGGCTTTGGCCCAATTACAGGAAGAGCATGAGCAAATCAAAGCAAGAAAGAAGGAATCAGACCAACAACACCTCCAATGGAATGATTACAAGTCCATGCCTTTCACCCAATGTGTTGTGAATGAAACATTAAGAGTTGCCAACATAATCAGTGGCGTATTCAGGAGGACAATGACAGACGTAAATATCAAAGGTTACACGATTCCAAAAGGATGGAAGGTTTTTGCATCATTTCGTGCAGTACATTTGGACCATGAGCATTTCAAAGATGCTCGCACTTTTAACCCATGGAGATGGCAAAAGAATAGCTCGGGGGCAACGACGCTAAATGCATTTACACCGTTTGGTGGAGGTCCAAGATTATGCCCAGGTTACGAGCTGGCCAGAGTAGAACTCTCTGTTTTCCTTCATCATCTTGTCACCCAATTTAGTTGGGTTCCAGCAGAAGATGATAAGTTAACAGTCATCTGGACACATGAAGGATGCGAGTCGAAATATGGAGCAACTCAATAG | 1413 | 47.06 | MAFFSFFFFLFSSVLASSLFFLFLRPTRFRRVRLPPGTLGLPLIGETLQLISAYKTENPEPFIDERVRRFGPVFTTHLFGEPTVFSADWETNRFILQNEEKLFECSYPGSISNLLGRHSLLLMKGSLHKRMHSLTMSFGNSSIIRDHLLVDVDRLIRLNLNSWTGRIFLMEEAKKITFELAVKQLMSFDRCEWTQNLMKEYLLVIEGFFTVPLPLFSSTYRRAIQARRKVAEQLGTVVRERRKESENGARKKDMLGALLAGEDALSDEQIVDFLLALLVAGYETTSTTMTLAVKFLTETPLALAQLQEEHEQIKARKKESDQQHLQWNDYKSMPFTQCVVNETLRVANIISGVFRRTMTDVNIKGYTIPKGWKVFASFRAVHLDHEHFKDARTFNPWRWQKNSSGATTLNAFTPFGGGPRLCPGYELARVELSVFLHHLVTQFSWVPAEDDKLTVIWTHEGCESKYGATQ | 470 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 4793282 | 4800209 | + | ClG42_07g0041400.10 | Clacu07g0414 | 253012 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu07g0414 | 470 | PRINTS | E-class P450 group I signature | 422 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | E-class P450 group I signature | 337 | 355 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | E-class P450 group I signature | 289 | 315 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | E-class P450 group I signature | 269 | 286 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | E-class P450 group I signature | 412 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | E-class P450 group I signature | 377 | 401 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu07g0414 | 470 | Gene3D | Cytochrome P450 | 24 | 465 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PANTHER | CYTOCHROME P450 26 | 33 | 443 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Clacu07g0414 | 470 | FunFam | Cytochrome P450 90A1 | 24 | 466 | - | - | |
| Clacu07g0414 | 470 | Pfam | Cytochrome P450 | 209 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | SUPERFAMILY | Cytochrome P450 | 28 | 457 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | CDD | CYP90-like | 66 | 455 | - | - | |
| Clacu07g0414 | 470 | PRINTS | P450 superfamily signature | 422 | 433 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | P450 superfamily signature | 280 | 297 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | P450 superfamily signature | 338 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | PRINTS | P450 superfamily signature | 413 | 422 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0414 | 470 | Coils | Coil | 303 | 323 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu07g0414 | Clacu-Chr7:4793282 | Clacu07g0913 | Clacu-Chr7:22881363 | 2.80E-94 | dispersed | |
| Clacu07g0414 | Clacu-Chr7:4793282 | Clacu09g0062 | Clacu-Chr9:628159 | 5.70E-95 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu07g0414 | K09588 | - | csv:101216594 | 799.66 |