Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu07g0545 | ATGGAGGGATCTATAATCGGTGGTTTCGTGTCGGTTTTTCCGGTGGCGGTTGCGGTGACGGTAGTGGCGATATTGGTCCATTTGTACTTTTACGGGGCGTGGAGGAGGACGGCGGAGGTAAGGAGGAAGTTGAGAGCACAAGGTGTGATAGGGCCGCCGCCGTCGGTTCTGTATGGTAACTTGCCGGAGATGCAGAAGATTCAGTTGCAGACAGCAGCTATGGCTTCTCCGCCGCATGGTGCATCGGCGATTATCGCTCATGATTATACATCCACTCTCTTTCCCTATTTTGTCGAGTGGAGGAAGCAATACGGGCCATTATACACGTACTCGACAGGGATGAGGCAGCATCTGTACGCCAACAAGGTGGAGCTTGTCAAGGACTTGAACTTTTCCAACAATATCAACTTGGGGAAGCCCTTCTATGTCACCAAAAAGCTTGCTCCCATTCTTGGCCATAGCGTGGTTCGCTCGAATGGCGCCGTTTGGGCAGTGCAACGTAAGATCATTGCCCCTGAGTTCTTCATGGACCGTGTTCGGGCCATGGTGGGGCTCATGGCCGATGCAGCATTGTGTCTGATCGACAAATGGGAGAGCAGAATCGGAGACGGAGCAACCGCCGAGATTGAGGTTGATGAAGATCTAAGAGGGTTCTCGGCGGATGTCATTTCTAGAGCTTGCTTTGGGAGTTGGTATGAGAAGGGGAAGGAGATTTTCTCCAAGCTTAGGGATCTTCAGCGGTTGGTTAGCGAGGGGAGCTTTCTGTTTGGTTACATTTCTTTGAGTGATAGATTTTTTCAACGAAGCAAACACAGAAGAATAAAAAAGCTGGAGAAAGAGATTGAGTCATTAATATGGGAGACGGTTCAACAACGCCAAAAAGAGTGCTCTAAAACCTCCTCGTCGGAGAAGGATCTATTACAACTGATAATGGAGGCCACCACCAATGACCCAAATATAGGAGCCAATGACTCTTCCAAAAACTTCATTGTTGACAACTGCAAGAGCATCTACTTTGCGGGCCATGAGTCCACCGCCGTCGCTGCCACTTGGTCCTTGATGCTCCTCGCCCTCCATCCTGAATGGCAAGATTGTATCCGATCCGAGTTTGCTCACGCTTGCCCTGACGGTCACCCCGACATGGCCGTGATTTCTCAACTTAAATCGGTAAGTATGGTGGTCCATGAAACATTGCGTTTATACCCTCCAGCAGCATTTGTGGCGAGGGAGACATTTGCCGAGATGCAACTTGGGAACGTGGTGGTTCCAAAGGGCGTTTGCTTGTGGACTTTGATTCCGTCGCTACACAGAGAAGTCGAAATATGGGGAGAAGATGCGAATAAGTTCAAGCCAGAGCGATTCGAAAATGGCATAGCCAAGGCGTGCAAGTTCCCTCAGGCCTACGTGCCATTCGGGGCGGGTCCTAGACTATGCTTGGGGAAGAACTTTGCATTAGTTGAGTTGAAGATAATAATTTCTCTTGTAGTATCCAAGTTTAGATTTTCATTGTCTCCTGAGTATCGCCATTGTCCTTCTTATAGAATGATTGTGGAGCCTGCAAATGGAGTGAAAATTGTTTTCCAAAGGCTTTGA | 1593 | 48.9 | MEGSIIGGFVSVFPVAVAVTVVAILVHLYFYGAWRRTAEVRRKLRAQGVIGPPPSVLYGNLPEMQKIQLQTAAMASPPHGASAIIAHDYTSTLFPYFVEWRKQYGPLYTYSTGMRQHLYANKVELVKDLNFSNNINLGKPFYVTKKLAPILGHSVVRSNGAVWAVQRKIIAPEFFMDRVRAMVGLMADAALCLIDKWESRIGDGATAEIEVDEDLRGFSADVISRACFGSWYEKGKEIFSKLRDLQRLVSEGSFLFGYISLSDRFFQRSKHRRIKKLEKEIESLIWETVQQRQKECSKTSSSEKDLLQLIMEATTNDPNIGANDSSKNFIVDNCKSIYFAGHESTAVAATWSLMLLALHPEWQDCIRSEFAHACPDGHPDMAVISQLKSVSMVVHETLRLYPPAAFVARETFAEMQLGNVVVPKGVCLWTLIPSLHREVEIWGEDANKFKPERFENGIAKACKFPQAYVPFGAGPRLCLGKNFALVELKIIISLVVSKFRFSLSPEYRHCPSYRMIVEPANGVKIVFQRL | 530 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7114148 | 7118415 | + | ClG42_07g0054500.10 | Clacu07g0545 | 253143 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu07g0545 | 530 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 471 | 480 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | E-class P450 group I signature | 329 | 346 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | E-class P450 group I signature | 468 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | E-class P450 group I signature | 478 | 501 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | E-class P450 group I signature | 349 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | E-class P450 group I signature | 101 | 120 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | E-class P450 group I signature | 218 | 236 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | E-class P450 group I signature | 391 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | Coils | Coil | 274 | 294 | - | - | |
| Clacu07g0545 | 530 | Gene3D | Cytochrome P450 | 33 | 530 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | Pfam | Cytochrome P450 | 92 | 524 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 25 | 522 | IPR050665 | GO:0004497(PANTHER) | |
| Clacu07g0545 | 530 | PRINTS | P450 superfamily signature | 469 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | P450 superfamily signature | 340 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | P450 superfamily signature | 392 | 403 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | PRINTS | P450 superfamily signature | 478 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0545 | 530 | SUPERFAMILY | Cytochrome P450 | 88 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu07g0545 | Clacu-Chr7:7114148 | Clacu11g0418 | Clacu-Chr11:3931952 | 1.10E-78 | dispersed | |
| Clacu06g0844 | Clacu-Chr6:10500295 | Clacu07g0545 | Clacu-Chr7:7114148 | 4.90E-16 | transposed | |
| Clacu11g0692 | Clacu-Chr11:6772761 | Clacu07g0545 | Clacu-Chr7:7114148 | 1.80E-89 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu07g0545 | K20661 | - | csv:101216582 | 922.924 |