Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0649 AACCTCTGTTCTTGCCAATTTATATATTCTTCTTCTTTCTCAACTACGCAAGAACAGCACCACACGATGGGATTTAGAGAAGTTTGGTTGTTGTTGTCAATAATGCTTGCAATTTCAAGTGCTGCTGTTGATCAACAGACTTACATTATTCATATGGACACCACAAAGATGGTCACCACCAACCCTGAACAATGGTACAAAGCCATGATTGATTCAGTCAATGAACTCTCGTCTCTTGACGACAACGAAGAAGAAGCATCAAACTTTGCTGAGATTCTCTACGTCTACAAAACTGCCCTTTCAGGTTTTGCTGCAAAGCTTTCCACAAAAAAACTTCATTCTTTGAGCAAAATTCCTGGCTTTCTAGCAGCCACTCCAAATGAACTACTACAGCTTCACACCACTCACTCCCCTCAGTTCCTGGGCCTACAAAGAGACCATGGCCTTTGGAATTCTTCAAACATGGCTTCTGATATAATCATTGGTTTGCTTGACACTGGCATTTGGCCTGAGCATATAAGTTTCCAAGACAAGGGTCTGCCCCCTGTGCCCTCAAAATGGAAAGGCATTTGCCAAGCAGGCCCAAAGTTCTCACCTTCAAATTGTAACAAAAGGCTCATTGGAGCAAGTGCCTTTATTAAAGGCTACGAGGCCATCGTTGGTAGATTGAATGAAACAGGGACGTTCCGGTCGCCCCGAGACTCGGATGGGCATGGGACACACACAGCTTCGACTGCTGCTGGAAATATTGTAAACAAAGCAAACTTTAATAACCAAGGCATGGGAGTAGCCACTGGAATGAGCTTCAGTTCAAGGATCGTAGCATACAAAGTATGTTGGCCCTTAGGGTGTGCAAATGCGGATATTCTGGCAGCCATGGACAGTGCCGTCGCAGACGGAGTCGATGTTCTATCACTCTCTTTGGGTGGCGGTGCTGGTTCCTTTTACAGAGATAACATTGCCATAGCTGCATTTGGTGCTATTCAAAATGGGGTTTTTGTTTCATGTTCAGCTGGTAATTCTGGCCCATCATCCTCAACTGTTGGAAATGCAGCCCCATGGATCATGACAGTTGCTGCTAGCTACACAGACAGAACTTTCCCAACCACTGTAAAGCTTGGAAATAGACAAGTTTTTGAAGGCTCGTCTTTGTATTATGGTAAGAATATAAATGAACTCCCACTTGTTTATAACAATACTGCTGGTGATGGACAAGAAACAAATTTTTGCACTGCTGGTTCACTTGACCCATCAAAGGTGAAGGGAAAAATTGTGTTGTGTGAAAGAGGATCAAACTCAAGAACTGCAAAAGGAGAGCAAGTAAAATTAGCTGGAGGAGCTGGAATGATTCTAATCAACACACAATTTGAAGGTGAAGAGCTTTTTGCTGACCCTCATGTTTTGCCAGCCACGACTCTTGGAGCTAAAGCTGGCAAAGCCATCTTAGACTACATAGCTTCCTCGAAAAGTCAAGCGAAAGCTTCGATCGCATTCCAAGGGACTAAATATGGAAGCCAAGCGCCAAGAGTGGCTGCATTTTCTTCTCGAGGGCCCAGCTTTGTTGGACCAGATGTGATAAAGCCAGATGTAACTGCACCTGGTGTTAATATATTGGCTGCTTGGCCGCCGATTGTGAGCCCAAGTGAGCTTGAGTCCGATAAAAGAAGAGTGTTGTTCAATATCATTTCCGGGACTTCTATGTCTTGCCCTCATGTTAGCGGTTTAGCTGCATTGCTTAAATCGGCTCACAAGGATTGGTCGCCTGCTGCGATTAAATCCGCGCTCATGACCACAGCTTACGTAAGTGACAATAAAATGAGTCTCATTTCTGACGTCGGTCATGCTAGTGGCGGACCTGCGGACCCTTTTGCATTCGGTTCTGGCCATGTCAATCCCGAGAAAGCTTCCGATCCAGGTCTCGTATACGATATCGCGCCCCAAGACTACATAAACTACTTGTGTAGCTTGAAGTATAACTCAACACAAATTGCTTTAGTTTCAAGAGGGAAATTCACATGTTCATCAAAAAGAACTATTCTTCAACCAGGAGACTTGAACTACCCTTCTTTCTCTGTGTTCATGAAGAAGAAGGCCAAAAATGTTACTATAACACTAAAGAGAACAGTGACAAATGTTGGTATCCCAAGAAGTGATTACACTGTTAAAATCAATAATCCAAAAGGAATAGCAGTTATTGTGAAGCCAGAGAAGTTAAGTTTTGGGAGCTTGGGAGAGAAGTTGAGTTACCAAGTGAGTTTTGTTGGATTGGGAGGAAAAGAAGCTTCGGGTGAATTTTCTTTTGGATCTCTTGTTTGGGTCTCAGGAAAATACGCTGTTAGAAGTCCTATAGCAGTAACTTGGCAATAG 2367 43.6 NLCSCQFIYSSSFSTTQEQHHTMGFREVWLLLSIMLAISSAAVDQQTYIIHMDTTKMVTTNPEQWYKAMIDSVNELSSLDDNEEEASNFAEILYVYKTALSGFAAKLSTKKLHSLSKIPGFLAATPNELLQLHTTHSPQFLGLQRDHGLWNSSNMASDIIIGLLDTGIWPEHISFQDKGLPPVPSKWKGICQAGPKFSPSNCNKRLIGASAFIKGYEAIVGRLNETGTFRSPRDSDGHGTHTASTAAGNIVNKANFNNQGMGVATGMSFSSRIVAYKVCWPLGCANADILAAMDSAVADGVDVLSLSLGGGAGSFYRDNIAIAAFGAIQNGVFVSCSAGNSGPSSSTVGNAAPWIMTVAASYTDRTFPTTVKLGNRQVFEGSSLYYGKNINELPLVYNNTAGDGQETNFCTAGSLDPSKVKGKIVLCERGSNSRTAKGEQVKLAGGAGMILINTQFEGEELFADPHVLPATTLGAKAGKAILDYIASSKSQAKASIAFQGTKYGSQAPRVAAFSSRGPSFVGPDVIKPDVTAPGVNILAAWPPIVSPSELESDKRRVLFNIISGTSMSCPHVSGLAALLKSAHKDWSPAAIKSALMTTAYVSDNKMSLISDVGHASGGPADPFAFGSGHVNPEKASDPGLVYDIAPQDYINYLCSLKYNSTQIALVSRGKFTCSSKRTILQPGDLNYPSFSVFMKKKAKNVTITLKRTVTNVGIPRSDYTVKINNPKGIAVIVKPEKLSFGSLGEKLSYQVSFVGLGGKEASGEFSFGSLVWVSGKYAVRSPIAVTWQ 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11480330 11484849 - ClG42_07g0064900.10 Clacu07g0649 253247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0649 788 Gene3D Peptidase S8/S53 domain 158 649 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0649 788 CDD Peptidases_S8_3 130 600 IPR034197 -
Clacu07g0649 788 SUPERFAMILY Subtilisin-like 132 640 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0649 788 Gene3D - 653 787 - -
Clacu07g0649 788 ProSiteProfiles Serine proteases, subtilase domain profile. 140 636 - -
Clacu07g0649 788 Pfam Fibronectin type-III domain 684 785 IPR041469 -
Clacu07g0649 788 Pfam Peptidase inhibitor I9 47 133 IPR010259 -
Clacu07g0649 788 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Clacu07g0649 788 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 34 133 IPR037045 -
Clacu07g0649 788 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 47 783 IPR045051 -
Clacu07g0649 788 FunFam Subtilisin-like protease SBT1.5 158 376 - -
Clacu07g0649 788 CDD PA_subtilisin_like 370 490 - -
Clacu07g0649 788 Pfam Subtilase family 157 628 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu07g0649 788 Gene3D - 364 503 - -
Clacu07g0649 788 FunFam Subtilisin-like protease SBT1.5 653 788 - -
Clacu07g0649 788 SUPERFAMILY PA domain 392 486 IPR046450 -
Clacu07g0649 788 FunFam subtilisin-like protease SBT1.5 364 503 - -
Clacu07g0649 788 Pfam PA domain 393 481 IPR003137 -
Clacu07g0649 788 PRINTS Subtilisin serine protease family (S8) signature 156 175 IPR015500 -
Clacu07g0649 788 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Clacu07g0649 788 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0649 Clacu-Chr7:11480330 Clacu09g0110 Clacu-Chr9:1017185 7.60E-193 dispersed
Clacu07g0648 Clacu-Chr7:11384816 Clacu07g0649 Clacu-Chr7:11480330 0.00E+00 tandem
Clacu07g0649 Clacu-Chr7:11480330 Clacu07g0650 Clacu-Chr7:11589707 8.10E-110 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0649 - - - 0.0