Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0652 ATGTTTGCCATGTCGATATCGAAATCTTCCCGTGTTGTCGTCTTTGTTGTTTTGTTTGTTGTAGGATACGTTGCTGGCTTAGACGAGGAGGAGGAAAAGACTCATTTCATTGTTTTCCTTGAAAATAAACCTATTTTAAATGAGGTTGATGCAGTAGAAACACATCTAAATGTTCTCATGTCAGTGAAGGAAAGCCATGCGGAGGCAAGGGAGTCGATGGTCTATAGTTACACGAAAAGCTTCAACGCCTTTGCTGCCAAACTTACTGAAGAGGAAGCCAAACAATTGTCAACGAGGGAAGATGTGCATCATGTGATCCCAAACAAGTATAGAAAGCTACAAACAACAAGATCTTGGGACTTCATTGGATTGTCTTCCAATGCAAGAAGAAATACCAAACAGGAGAATGACATTATTGTGGGTTTATTTGATACCGGAATCACTCCAACTGCCGATAGCTTTAAAGATGATGGGTTTGGTCCTCCACCCAAAAAATGGAAAGGCACTTGTCACCACTTTGCCAATTTCACTGGCTGCAATAAAAAGCTTATCGGAGCAAGATATTTCAAGCTCGATGGCAGCCCCGATCCCGCCGACATCTTGTCACCAGTAGATGCCGATGGCCATGGCACGCACACATCGTCAACGGCAACGGGCAATGCAGTTGCTGGAGCCAGCCTTTTCGGTCTGGCCGAAGGAACCGCCCGCGGAGGGGTACCGTCAGCAAGAGTTGCCATGTATAAGGTCTGCTGGGCTAGTAGCGGGTGCTCCGATATGGATATTCTGGCCGCCTTCGACGCCGCTATACAGGATGGTGTCGACGTCATTTCGATATCGATCGGCGGTGGCAGCTTCAACAATTACTCCGATGACTCGATCTCCATCGGTGCGTTTCATGCCATGAAGAAGGGCATCATCACCGTGACCTCCGCCGGCAACAGTGGTCCGACTGCCGGCAGTGTTGTCAACCACGCGCCGTGGATTGTGACGGTTGCTGCTAGTGCGATTGATCGGAAATTTATCAGCCCATTAGAGTTGGGCAATGGGAAGAACATCTCTGGAGTAGGGATAAACATCTTCAATCCAAAGCAAAAAATGTACCCATTAGTGAGTGGAGGGGATGTGGCAAGGAACTCAGAAAGCAAAGACAGTGCAAGCTATTGTGAAGAGGACTCACTTGATCCAGCCAAAGTCAAAGGCAGCCTTGTTTTCTGTAAATTGATGACTTGGGGAGCTGATTCTGTTATCAAATCACTTGGTGCTAATGGTGTTATCATTCAAAGTGATCACTTTCTTGACAATGCTGATATCTTCATGGCCCCTGCCACCATGGTTAGCAGCTCTGTTGGTGCTACTATTCACACCTACATCAAGTCCACCAGAACACCAACGGCAGTAATATACAAAACAAGACAACTCAAGGCAACAGCTCCCGTGGTAGGTTCCTTCTCATCCAGAGGCCCAAATCCAGGCTCCAACCGCATTCTAAAGCCGGACATAGCAGCGCCAGGAGTGGACATATTGGCTGGTTACACACCATTGAAGTCATTGACAGGGCTAAAGGGTGACACCCAATTCTCCAAATTCACACTCATGTCTGGCACTTCTATGGCTTGCCCCCACGTCGCGGCTGCCGCCGCCTACGTCAAGTCTTTCCACCCTCTTTGGTCTCCCGCCGCCATTAGATCCGCCTTGCTCACCACTGCGAGACCGATAAGCCGACGACTAAACCCGGACGGCGAATTTGCGTACGGCGCTGGCAACCTAAATCCATCAAGAGCCATAAGTCCTGGTCTAATCTACGATCTCAATGAAATGTCGTACATCCAATTCCTTTGCCGCGAAGGCTACACCGGATCTTCAATCGCCGTCCTCGCCGGAACCAAAACCATAAACTGCTCCACTCTAATCCCCGGCCAAGGACATGACGCTCTCAATTATCCAACCTTTCAACTCAGCCTCAAAAGCACCCAAAGACCGACCACCACTACGTTTCGACGACGAGTCACTAACGTGGCTCACCCCGTCTCTGTCTACAATGCCACCATCAAGGCTCCTCCAGGGGTGGAGATCACAGTTACGCCGACCACTCTGTCATTTTCACGGTTGCTGCAGAAGAAGAGTTTTAAGGTTGTTGTGAAGGCAAGTCCTTTGCCGTCGGGGAAAATGGTGTCGGGTTCTCTTGCTTGGATTGGTGCTCGACATGTTGTGAGAAGTCCTATTGTTGTTTATAGCCCATGA 2241 48.95 MFAMSISKSSRVVVFVVLFVVGYVAGLDEEEEKTHFIVFLENKPILNEVDAVETHLNVLMSVKESHAEARESMVYSYTKSFNAFAAKLTEEEAKQLSTREDVHHVIPNKYRKLQTTRSWDFIGLSSNARRNTKQENDIIVGLFDTGITPTADSFKDDGFGPPPKKWKGTCHHFANFTGCNKKLIGARYFKLDGSPDPADILSPVDADGHGTHTSSTATGNAVAGASLFGLAEGTARGGVPSARVAMYKVCWASSGCSDMDILAAFDAAIQDGVDVISISIGGGSFNNYSDDSISIGAFHAMKKGIITVTSAGNSGPTAGSVVNHAPWIVTVAASAIDRKFISPLELGNGKNISGVGINIFNPKQKMYPLVSGGDVARNSESKDSASYCEEDSLDPAKVKGSLVFCKLMTWGADSVIKSLGANGVIIQSDHFLDNADIFMAPATMVSSSVGATIHTYIKSTRTPTAVIYKTRQLKATAPVVGSFSSRGPNPGSNRILKPDIAAPGVDILAGYTPLKSLTGLKGDTQFSKFTLMSGTSMACPHVAAAAAYVKSFHPLWSPAAIRSALLTTARPISRRLNPDGEFAYGAGNLNPSRAISPGLIYDLNEMSYIQFLCREGYTGSSIAVLAGTKTINCSTLIPGQGHDALNYPTFQLSLKSTQRPTTTTFRRRVTNVAHPVSVYNATIKAPPGVEITVTPTTLSFSRLLQKKSFKVVVKASPLPSGKMVSGSLAWIGARHVVRSPIVVYSP 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 11695233 11705298 + ClG42_07g0065200.10 Clacu07g0652 253250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0652 746 Gene3D - 337 473 - -
Clacu07g0652 746 CDD PA_subtilisin_like 344 467 - -
Clacu07g0652 746 CDD Peptidases_S8_3 112 569 IPR034197 -
Clacu07g0652 746 Pfam Peptidase inhibitor I9 37 114 IPR010259 -
Clacu07g0652 746 Pfam Subtilase family 136 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu07g0652 746 ProSiteProfiles Serine proteases, subtilase domain profile. 118 595 - -
Clacu07g0652 746 Gene3D - 612 745 - -
Clacu07g0652 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 61 742 IPR045051 -
Clacu07g0652 746 FunFam Subtilisin-like protease SBT1.5 137 349 - -
Clacu07g0652 746 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Clacu07g0652 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
Clacu07g0652 746 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Clacu07g0652 746 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Clacu07g0652 746 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Clacu07g0652 746 Gene3D Peptidase S8/S53 domain 137 608 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0652 746 SUPERFAMILY Subtilisin-like 120 595 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0652 746 Pfam Fibronectin type-III domain 645 743 IPR041469 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0358 Clacu-Chr7:4132170 Clacu07g0652 Clacu-Chr7:11695233 3.80E-178 dispersed
Clacu07g0359 Clacu-Chr7:4145780 Clacu07g0652 Clacu-Chr7:11695233 5.20E-191 dispersed
Clacu07g0652 Clacu-Chr7:11695233 Clacu10g0390 Clacu-Chr10:4921865 1.10E-148 dispersed
Clacu07g0650 Clacu-Chr7:11589707 Clacu07g0652 Clacu-Chr7:11695233 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0652 - - - 0.0