Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0694 ATGGAGAAGGAAATGAAGAAGACGAGCTTGAAGATGGAGAAGGAAATGACCGAAGACGAGCCTGAAGAAACTGAAGAAGACGTGAGATGGTTGTACGAAATTCAGAGGGGGCCAGAGTCTGTGTTGCAGTTATGGGCTTGTAGCTTCTACTCTGTCAATCACTTCCCAATGGATCCCCCAACCTCCTACCGTAGTCGCAGAACCGCCAACAAATCTGAGCTCTATTCCACAGTTGTCATCCATTCCAATTCTGATTCCGACTCCGACAACAATCCTGACGATCGGAATCTTCACCCTCCACGAAGGCCACCCAGCGAAGGACAAGACCTTTACGCCACAATGCTCTATAAGGACGTTGATAAGCCCCGCGGCGACGACGACGACGACGATGATTCCTCTCTCCCTCCTCTCCTCAAACGTCTTCCCAAGGATTTCGGTGGCGGAGCCCCAATTGACTACGAGGACGACCATGCTTTTGATTTCGATCACGATACTGAAGACTTCGGTACCATGATCGTCAAGACGGACAGAAATCGCCCTCGAAATCGCTCTATGTCTTCTTCAGTTTCGACGAAGCCTCGAACTTCGCCGCTGCCGTTTATGAACTTTCAGCCGGGGAGCCCCGGGAAGAGAGCTGGCAGTGAAGAAGGCGACGACAGCGAGGAAGATGATGGTGATGAGTATTCTACGTTTGTGGTGAGGTCCACGGGGAGGTCGCGGAACAGAGAATCTGTTAGTGGGACTGTTGTTCGAAGGACTGCTGGTAGTCGCAGTGGTTCCAGAGATGGAGGCGGAGGACATGAGGGGTCCACGATGGGCAGAGCGGTCGCCAGTATGCAAGGTATGGGAGAGTTAGGGTTTGGGAAGCAGAGGAAGGGGAATGGATCACCGAGGAGTGAGGAAGGCGGTGGTCGGATACGCAGTAAGGTATCCTCAAGTTCGATTCCGGAAAGCATCACCAGGGAAGATCCACATTCTAAGTATGAATTGCTCAACGAACTTGGAAAGGGGTCCTATGGGGCTGTATATAAAGCAAGAGATATTAAGACCTCTGAGCTGGTTGCTATCAAGGTCATTTCTTTATGTGAAGGGGAGGAAGGATATGAAGAAATTCGTGGTGAAATTGAGATGTTGCAGCAATGCAGTCATCCAAATGTTGTTCGCTATCTTGGGAGCTATCAAGGAGAAGAGTATCTATGGATAGTAATGGAGTACTGTGGGGGTGGCAGTGTTGCTGACTTGATGAATGTTACCGAGGAACCTCTAGAGGAATATCAGATTGCATATATCTGTAGGGAGGCATTGAAGGGCCTCACTTATCTTCATTCAATATTCAAAGTTCACAGAGATATCAAGGGTGGTAATATTTTGTTAACTGAGCAAGGAGATGTCAAGTTGGGCGATTTTGGAGTTGCAGCCCAGCTGACTAGGACCATGTCAAAGCGCAATACATTCATTGGCACTCCACATTGGATGGCTCCAGAAGTTATTCAGGAAAGTCGATACGATGGGAAGGTGGATGTGTGGGCTCTTGGTGTTTCTGCTATTGAAATGGCTGAGGGGCTTCCTCCAAGATCAGCAGTGCATCCAATGAGGGTTTTATTCATGATATCGATTGAGCCAGCTCCAATGCTTGAAGACAAAGAAAAATGGTCCTTGTTGTTCCATGATTTTGTTGCAAAGTGTCTGACAAAAGATCCCCGTTCACGTCCTGCTGCTTCTGAAATGTTGAAGCACAAATTCATTGAGAAATGCAGATGTGGGGCATCGGCAATGTTGCCCAAGATTGAAAAAGCTAGGAAAATCAGGACTTTAATGGCTCAGCAAGCGCATAGTATTGCTCCAGATGCATCAGGAGATGGTACCATAGTAGCTGCAAATTTGAATCAAGATTACGGAGATACTGTTCCTTCAAAGCCTCAGAATATTGGACTTCAGGTAGCAAATGAAATGGCAGCTGGTGGCACATGGAGGAAGCAAGAGCAATCCGGCACTGAATTTGTAGCAGAAGGTACTTTTGGCACTGTAATAGTCCATGATGGAGATGAGAATGATAAGGTGGCCTCTCAACTGGATATTGGCATTGCTGAACCACCAACTGGTTCCTTGCGCAATCAGAGCCTATCCGTTAGTGTAACTAGAGTCGACTCAAGTGTGCTGGATCGTACAGGCGGTATTGTAAATAATATTCTTGATGGAAAATCAGATCCCACCATGCATGCATCTTCACCTTCATTCTTGGGTATTCATGAGCATAACACATTGAAGAATGAAACTGTCAGCCGAAAATCATTTGCTCTGCAGGACAAGCTTTGGTCCATTTATGCAGCGGGTAATACTGTACCCATTCCGTTCTTGAGGGCTACTGACATATCCCCTATTGCTTTGTTATCTGACAATGTCCTTGGAGGCGTGCAGCATGATAATAGGGGTACCGTAGCAGTGGAAACACTTCAGGAACTTTTCACTGGTGATGGACAATCAAAGAAGGGTCGTAGGGGTCAAAATGAGATGCCCCTTCCACCCAGTGTTTATCAAAGACTTACTTCAAGTCCAACACTATTGAACCTTGCCCAGGCTTTAGCTTACCACAGAATGTGTTATGAAGATATGCCGCTTCAGGAGTTGCAGGCAACTCAAGAACAACAAACCATTCAAAATCTTTGTGATACTCTTAGAACTATCCTTCGATTGTAG 2697 46.83 MEKEMKKTSLKMEKEMTEDEPEETEEDVRWLYEIQRGPESVLQLWACSFYSVNHFPMDPPTSYRSRRTANKSELYSTVVIHSNSDSDSDNNPDDRNLHPPRRPPSEGQDLYATMLYKDVDKPRGDDDDDDDSSLPPLLKRLPKDFGGGAPIDYEDDHAFDFDHDTEDFGTMIVKTDRNRPRNRSMSSSVSTKPRTSPLPFMNFQPGSPGKRAGSEEGDDSEEDDGDEYSTFVVRSTGRSRNRESVSGTVVRRTAGSRSGSRDGGGGHEGSTMGRAVASMQGMGELGFGKQRKGNGSPRSEEGGGRIRSKVSSSSIPESITREDPHSKYELLNELGKGSYGAVYKARDIKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCSHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLEEYQIAYICREALKGLTYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLLFHDFVAKCLTKDPRSRPAASEMLKHKFIEKCRCGASAMLPKIEKARKIRTLMAQQAHSIAPDASGDGTIVAANLNQDYGDTVPSKPQNIGLQVANEMAAGGTWRKQEQSGTEFVAEGTFGTVIVHDGDENDKVASQLDIGIAEPPTGSLRNQSLSVSVTRVDSSVLDRTGGIVNNILDGKSDPTMHASSPSFLGIHEHNTLKNETVSRKSFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGVQHDNRGTVAVETLQELFTGDGQSKKGRRGQNEMPLPPSVYQRLTSSPTLLNLAQALAYHRMCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 898
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 13901304 13929913 - ClG42_07g0069400.10 Clacu07g0694 253292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0694 898 ProSiteProfiles Protein kinase domain profile. 328 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu07g0694 898 Gene3D Transferase(Phosphotransferase) domain 1 324 617 - -
Clacu07g0694 898 SMART serkin_6 328 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu07g0694 898 MobiDBLite consensus disorder prediction 232 255 - -
Clacu07g0694 898 MobiDBLite consensus disorder prediction 285 324 - -
Clacu07g0694 898 FunFam serine/threonine-protein kinase dst1 isoform X1 325 615 - -
Clacu07g0694 898 MobiDBLite consensus disorder prediction 182 202 - -
Clacu07g0694 898 MobiDBLite consensus disorder prediction 1 26 - -
Clacu07g0694 898 MobiDBLite consensus disorder prediction 81 151 - -
Clacu07g0694 898 SUPERFAMILY Protein kinase-like (PK-like) 325 583 IPR011009 -
Clacu07g0694 898 MobiDBLite consensus disorder prediction 87 102 - -
Clacu07g0694 898 MobiDBLite consensus disorder prediction 172 273 - -
Clacu07g0694 898 CDD STKc_MAP4K3_like 327 582 - -
Clacu07g0694 898 ProSitePatterns Protein kinases ATP-binding region signature. 334 357 IPR017441 GO:0005524(InterPro)
Clacu07g0694 898 Pfam Protein kinase domain 328 582 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu07g0694 898 FunFam Aurora kinase A 320 409 - -
Clacu07g0694 898 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 265 621 IPR050285 GO:0006468(PANTHER)|GO:0035556(PANTHER)|GO:0043408(PANTHER)
Clacu07g0694 898 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0694 Clacu-Chr7:13901304 Clacu11g1352 Clacu-Chr11:23296682 0.00E+00 dispersed
Clacu07g0694 Clacu-Chr7:13901304 Clacu03g1576 Clacu-Chr3:29339844 8.50E-39 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73688 PF00069 Pkinase 1.40E-67 CL0016 Clacu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0694 - - - 0.0