Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0753 ATGATATTATCAGAAAAATTTTCTTTTGGAGATACAAAATATATTGATATCTCATTTTCCAATCAAGAACTTCTGTCCACCAAAATTCAGTTTTTTTGCTGGTCAGAAATGGCAGTGAATGAGACCGGAAGGGGTAGCTGTCCGGCGGCGATGAAAGCGACGTCGAACGGCGTGTTTCAAGGCGACAACCCGCTTGATTTCGCTCTCCCTTTAGCCATTCTTCAAATATGTTTAGTGGTTGTTCTTACTCGTCTTCTTGGTTTCCTTCTCCGACCACTCAGACAACCTCGAGTCATCGCTGAGATTGTCGGAGGAATATTGTTGGGACCGTCGGCAGTGGGGCGGAGCCAAGAATTTCTTCACAGAGTCTTTCCGGCAAGAAGCCTACCGGTGTTGGATACATTGGCAAATCTGGGTCTTCTGTTCTTCCTATTTTTGGTGGGGATGGAGTTAGATCTCAAATCCCTCCGTCGTACCGGAAAGGGTGCAATGGCCATAGCCATTGCCGGAATCACCCTCCCTTTCATCCTCGGCATTGGAACCTCCTATGTCCTCCGTTCCACCATCTCCAAAGGCGTCCATGGCCCTCCTTTTCTAGTTTTCATGGGCGTAGCTCTCTCCATTACCGCTTTCCCCGTCCTTGCCCGCATTCTCGCCGAACTCAAGCTCTTAACCACCAACGTCGGTCGCATGGCCATGTCTGCCGCCGCCGTCAATGACATCGCCGCTTGGATTCTCCTGGCCCTCGCCGTCGCCCTCTCCGGCACCGGCCGCTCCCCTCTCGTCTCCCTCTGGGTCTTCCTGTGCGGCTTTGCTTTTGTCCTGTTTTGCTTCTTCACTCTCCCGCCCATCTTCGGTTGGATTTCCCGCCACTGCTCCAATGGCGAGCCAGTAAGCGAACTCTACATTTGCGCCATTTTATCCAGCGTCTTGGCAGCTGGATTCATCACCGACTTAATTGGAATCCACGCCCTGTTTGGCGCTTTCGTCGTCGGTGTCTTCGTCCCAAAAGACGGCCCACTCGCTGGAGCCCTGGTGGAGAAAGTCGAAGATCTTGTATCGGGTCTATTCCTCCCTCTCTATTTCGTATCAAGCGGATTAAAAACCAACATTGCCACAATCAAAGGAGCTCAATCATGGGGTCTCCTCGTCCTGGTGGTATTCACCTCTTGTTTTGGGAAAATCATCGGCACAATCTCTGTAGCACTCTTTTGCAAGATGCCACTCCAAGAATCAATCGCTTTAGGATTCTTAATGAACACCAAAGGGCTAGTGGAATTAATTGTCCTAAACATAGGGAAAGACAGAAAAGTTTTAAATGACCAAACCTTTGCGATTTTAGTTCTAATGGCTATAATCACGACGTTCATCACAACCCCAGTCGTAATGGCGGTTTACAAGCCAGCAAAAAGAAAGAGCAAATCAGAATACACATGCAGAACAATCGAGCGAGAGGAGGGCAATTCAGAGCTGCGGATTTTGGCTTGCTTTCACTCTGTTAATAACATTCCTTCGATATTGAATCTGATAGAGGTTTCTCGTGGGAGGGAGGGTCGTGGTCGGCGGTTATGTGTTTATGCGATGCATTTGATGGAGCTGACGGAGAGGTCGTCGGCGATTGTAATGGTTCATAGAGCTAGAAAGAATGGATTGCCGTTTTGGAATAAAAGAGGAGGGCAGTCAGATTCGGATCAAATAGTGGTGGCTTTTGAGGCTTTTGAGCAGCTTAGTCGAGTGTCAATACGTCCAATGACGGCCATATCTGCGTTCTCAGATATGCATGAGGATATTTGTAACAGTGCCGACAGAAAACGTGCCGCCATTATCATCCTCCCATTCCACAAACACCAAAGGTTTGATGGATCTTTGGAGACGACACGAACTGATTTTCGATGGGTGAATCAAAAAGTTCTAGAACAACCACCATGCTCGGTTGGGATCTTAGTCGACAGAGGTTTCGGAGGTGGTTCACACATATGTGCTAGTAACGTTTCTTCCATCGTAACTGTCTTCTTCTTTGGCGGTCGTGACGATCGCGAAGCTTTAGCCTATGGTCGAAGAATGGCTGAACATCCAGGAATAACCCTAAATGTCGTTCGTATTCTTCCAAGCTCTGACATGGCTACAAAATCAACTATAGTTGACATGAATAAAGACGATAGCAATATTTCGGCACTCATGGATCAGAAAGTATTGATGGAGTTGAATGTGAAAAAAACAGAGGACGAGTCAATTAGATATGAAGAGAGAACAGTGAGCAAATGCAATGAGACCATTGAAATAATAAGAGAATTTAGTAGATGCAATTTGATATTGGTGGGTCAATCCCCTGAAGGCCAAGTAGTGGAAAGTCTTCATTTCAAAGGTGTTGAGTGCTCAGAGTTGGGTCCCATTGGCAACTTGTTGATATCATCTGAGCTCGCAATGTCAGCTTCAGTGTTGGTGGTGCAACAATTTCGTGGTCCATTATTGTCTTCTTCATCCACGTCTACAGCCATGGTATTGCCGGAAGAAGTTACTGAGTAA 2526 46.95 MILSEKFSFGDTKYIDISFSNQELLSTKIQFFCWSEMAVNETGRGSCPAAMKATSNGVFQGDNPLDFALPLAILQICLVVVLTRLLGFLLRPLRQPRVIAEIVGGILLGPSAVGRSQEFLHRVFPARSLPVLDTLANLGLLFFLFLVGMELDLKSLRRTGKGAMAIAIAGITLPFILGIGTSYVLRSTISKGVHGPPFLVFMGVALSITAFPVLARILAELKLLTTNVGRMAMSAAAVNDIAAWILLALAVALSGTGRSPLVSLWVFLCGFAFVLFCFFTLPPIFGWISRHCSNGEPVSELYICAILSSVLAAGFITDLIGIHALFGAFVVGVFVPKDGPLAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIKGAQSWGLLVLVVFTSCFGKIIGTISVALFCKMPLQESIALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAILVLMAIITTFITTPVVMAVYKPAKRKSKSEYTCRTIEREEGNSELRILACFHSVNNIPSILNLIEVSRGREGRGRRLCVYAMHLMELTERSSAIVMVHRARKNGLPFWNKRGGQSDSDQIVVAFEAFEQLSRVSIRPMTAISAFSDMHEDICNSADRKRAAIIILPFHKHQRFDGSLETTRTDFRWVNQKVLEQPPCSVGILVDRGFGGGSHICASNVSSIVTVFFFGGRDDREALAYGRRMAEHPGITLNVVRILPSSDMATKSTIVDMNKDDSNISALMDQKVLMELNVKKTEDESIRYEERTVSKCNETIEIIREFSRCNLILVGQSPEGQVVESLHFKGVECSELGPIGNLLISSELAMSASVLVVQQFRGPLLSSSSTSTAMVLPEEVTE 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18644497 18649761 + ClG42_07g0075300.10 Clacu07g0753 253351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0753 841 Gene3D - 71 476 IPR038770 -
Clacu07g0753 841 PANTHER CATION/H + ANTIPORTER 47 820 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
Clacu07g0753 841 Pfam Sodium/hydrogen exchanger family 82 461 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Clacu07g0753 841 Coils Coil 723 743 - -
Clacu07g0753 841 FunFam Cation/H(+) antiporter 15 71 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0753 Clacu-Chr7:18644497 Clacu07g0761 Clacu-Chr7:18715253 0.00E+00 dispersed
Clacu07g0749 Clacu-Chr7:18231485 Clacu07g0753 Clacu-Chr7:18644497 0.00E+00 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0753 K26731 - csv:101203169 1355.89