Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0763 ATGGCTTCGAATGCTACGGCAGTGACCACATGTCCAACTCCAATGAAAGCAACATCAAACGGGATTTTCCAAGGCGATAATCCTCTTGATTTTGCTCTCCCTCTTGTCATTCTGCAGATATGTTTGGTAGTCGCACTTACTCGTGGTCTTGCTTTTCTTCTCAGGCCGTTAAAACAGCCACGAGTGATTGGAGAAATTATTGGAGGAATACTTCTAGGACCATCAGCTCTTGGACGTAACAAGAACTTTCTTCATACGATATTTCCATCCAATAGTATGACATTGTTAGATACCATAGCAAACATTGGGTTGTTATTCTTTCTCTTTCTTGTGGGTCTTGAGTTAGATCTAAAGTCAATACGTCGTACTGGAAAGAAGGCCTTTGGCATTGCCATTACTGGAATTTGCGTTCCCTTTGCATTAGGAATTGGATCATCATTTGTCCTCCGAGGAACCATATCCAAAGGTGTAAATGCTTCTGCATTTCTCATATTCATGGGTGTTGCACTTTCGATAACAGCCTTTCCCGTCTTAGCTCGCATTCTTGCTGAGCTTAAACTACTGACGACTGATGTTGGCAGGATGGCTATGTCTGCTGCAGCAGTAAATGACGTAGCTGCCTGGATTCTCCTTGCTCTTGCCATTGCATTATCAGGTTCTGATAAATCTCCCCTAACTGCGGTTTGGGTCCTTTTATCTGGCTGCGGCTTTGTTGTGGCTGCTGTCGTCATTTTATCCCCAGTTTTCAAATGGATGACCAAGCAATGTTTTCAAGGGGAGCCTGTACGGGAAATCTACATATGCGCCACATTAGCTATTGTCCTAGCTGCTGGATTTGCCACGGATTTTATTGGGATACATGCTATGTTTGGAGCTTTTGTTGTTGGAGTATTAGTTCCAAAGGATGGACCATTAGTGGGTGCTTTGGTAGAGAAAATAGAGGATCTTGTTTCTGGTCTATTCCTGCCTCTGTACTTTGTCTCAAGTGGATTGAAGACTAATGTAGCCACAATTCAAGGAGCACAGTCCTGGGGTCTTCTAGTTTTAGTTATTGTCACCGCCTGTTCTGGAAAAATCCTTGGCACTTTTCTAGTGTCCCTTCTTTGTAAAGTACCCGTTCGTGAGGCTCTCGCGTTAGGATTTCTAATGAACACAAAAGGTTTGGTGGAGCTTATTGTTCTCAATATTGGAAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCAATAATGATTCTAATGGCTCTTTTTACTACTTTCATTACCACTCCCCTTGTCATTGCTGTATACAAGCCAGCAAGGAGTGCCAAATTAGCCGATTATAAACATAGGAAAATCGAACGGAAAAACAAGAATACGCAGCTTCGGATGTTGACCTGTTTCCATAGTGCAGGAAACATTCCATCAATTATAAATCTGCTTGAGGCCTCGAGAGGAATTCAGAAGGGAGAAGAACTTTGTGTATATGCAATGCATCTCATGGAGCTGTCCGAGCGGTCCTCAGCCATTTTAATGGTACATAAGGCCAGGAAAAATGGGTTGCCTTTCTGGAATAAGGGCCAGAGGTCAGATTCCAACCATGTTATTGTTGCGTTTGAAGCTTATCAACAACTGAGCACAGTATTCATCCGAGCGATGACCGCCATTTCCTCCATGTCTGACATACATGAAGATATCTGTGCTACTGCCGAGAGGAAAAGAACTGCAATCATAATTCTTCCATTCCACAAGCACCAGAGGGTGGATGGTTCCCTGGAGACTACTCAAAGCAGCATCCGTGTTGTTAATCAGAATGTCCTCGAGCATGCTCAATGTTCAGTTGGAATTTTCGTTGATCGGGGGTTGGGTGGAACAACCCATGTTTCTTCGAGCAATGTTTCACTTTTCATTGCTGTTCTATTCTTTGGTGGTGGAGATGATCGCGAAGCACTTTCTTATGGAGTTCGTATGGCTGAGCACCCTGGCATTAGGTTGATGGTTATTCGTTTCTTTGTTGAACCCGAGCCTGTTGGGGAGATAGTCAGTGCTGATACTGTTGGGAATTCTTCTGCGAAGATGGTTTCTCAGGATGATGAATTTCTTTCTGAGTTCAGGAACAATGTGAGCAATAACGATTCCGTCATATATGTAGAGAAAACCATAAAAAGTGCTGCAGAAGCAATGGATACAGTACAGGAGCTGAAAAACTGCAATCTGTATCTTGTTGGTCGAACACCGGATGTCAATTCAACCTTTGTCTTAAACAGAAGTGACTGTCCGGAGCTTGGTCCAGTTGGGAACCTGTTGACTTCACCGAACTTCACGATTTCAGCGTCGGTTTTGGTGGTGCAGCAATATCGTTCTGAGTTACTGGTGAATTCGGTTTCAGATTCTGCTGATGGAGAATCAGAATCATCATAA 2400 43.25 MASNATAVTTCPTPMKATSNGIFQGDNPLDFALPLVILQICLVVALTRGLAFLLRPLKQPRVIGEIIGGILLGPSALGRNKNFLHTIFPSNSMTLLDTIANIGLLFFLFLVGLELDLKSIRRTGKKAFGIAITGICVPFALGIGSSFVLRGTISKGVNASAFLIFMGVALSITAFPVLARILAELKLLTTDVGRMAMSAAAVNDVAAWILLALAIALSGSDKSPLTAVWVLLSGCGFVVAAVVILSPVFKWMTKQCFQGEPVREIYICATLAIVLAAGFATDFIGIHAMFGAFVVGVLVPKDGPLVGALVEKIEDLVSGLFLPLYFVSSGLKTNVATIQGAQSWGLLVLVIVTACSGKILGTFLVSLLCKVPVREALALGFLMNTKGLVELIVLNIGKDRKVLNDQTFAIMILMALFTTFITTPLVIAVYKPARSAKLADYKHRKIERKNKNTQLRMLTCFHSAGNIPSIINLLEASRGIQKGEELCVYAMHLMELSERSSAILMVHKARKNGLPFWNKGQRSDSNHVIVAFEAYQQLSTVFIRAMTAISSMSDIHEDICATAERKRTAIIILPFHKHQRVDGSLETTQSSIRVVNQNVLEHAQCSVGIFVDRGLGGTTHVSSSNVSLFIAVLFFGGGDDREALSYGVRMAEHPGIRLMVIRFFVEPEPVGEIVSADTVGNSSAKMVSQDDEFLSEFRNNVSNNDSVIYVEKTIKSAAEAMDTVQELKNCNLYLVGRTPDVNSTFVLNRSDCPELGPVGNLLTSPNFTISASVLVVQQYRSELLVNSVSDSADGESESS 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 18845183 18847957 + ClG42_07g0076300.10 Clacu07g0763 253361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0763 799 FunFam Cation/H(+) antiporter 15 35 437 - -
Clacu07g0763 799 Gene3D - 35 438 IPR038770 -
Clacu07g0763 799 Pfam Sodium/hydrogen exchanger family 44 425 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Clacu07g0763 799 PANTHER CATION/H + ANTIPORTER 11 787 IPR050794 GO:0006885(PANTHER)|GO:0012505(PANTHER)|GO:0015672(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0271 Clacu-Chr4:8511596 Clacu07g0763 Clacu-Chr7:18845183 2.70E-138 dispersed
Clacu07g0488 Clacu-Chr7:6006470 Clacu07g0763 Clacu-Chr7:18845183 1.50E-108 dispersed
Clacu07g0763 Clacu-Chr7:18845183 Clacu10g1516 Clacu-Chr10:28474025 1.40E-104 dispersed
Clacu07g0761 Clacu-Chr7:18715253 Clacu07g0763 Clacu-Chr7:18845183 3.50E-294 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0763 K26731 - csv:101223205 1430.23