Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0813 ATGATGGTTGTAGCCATCTCATTGGAGCAACTTAATCAACGCATGAGAATTTCTCTCCAAGTACCAAAACTTAATCACATTTACAAACATTTCAACATTGTTATGCCTTGTTCAATCCATGTGTTTCTTCACATCAATCAGACCAACCTCTCCAATACTCTTCTTTCCATCTCTAACTTTTCTCGGCAAAACAACATGAAAAACAGGAGATGCTTTCTTCTTGCTCTCTTCTTCTACGCCTTAATCTTTGAGAAACTGACAGTAAAACCAGAGGCAAGTGGCAAGCTTCTTCATATCGTACACCTCGAACATAACCAACATGATCCCAACTCCAGCATCGTCGAGATTCATCATAATTTCTTGTCTACTCTGCTGGGAAGTAAAAAGAAGGCTTCGAAATCCATGGTGTACAGTTATACACATGCCTTTTCTGGGTTTGCTGCAAAGCTCACAAAATCTCAAGCTTATCAGCTTTCTGAAATGCGTGGTGTGGTTCGAGTTCTTCCAAATGTTCTTTACGATCTCCATACAACTAGAAGCTGGGATTTTCTCGGCCTTTCTCCTTCTCCATCTCCCTCAAATCTTCTGCAGATGAGTAATTTGGGTGACGGAATAATCATTGGAGTAGTGGATACAGGAATTTGGCCGGAATCGGAGGCGTTCGACGATCAAGGATTGGGGCCGGTGCCAGTTCGGTGGAAAGGCGAGTGCCAATCAGGGGAACAATTCAAAGCGACGAGAGATTGCAATAGAAAAATCATAGGAGCCAAATGGTACGTTGATGGGTTCATAGCCGAATTTGGGGAATTCAACAGATCAGCAGTGAAGGAATTCATGTCTCCAAGAGATTCAAACGGACATGGGACTCAAACGGCGAGCACCGCCGCCGGTTCGTTCGTGAAAAATGTCAGTTACAGAGGCCTCGGCGGTGGGACTGCAAGGGGCGGCGCACCAGCAGCGCGGTTGGCAGTGTACAAGGCATGTTGGAGCTTGCCCGGTGGCGGTGGCCAGTGTTCGGCGGCGGACGTATTGAAGGGAATGGACGACGCCGTACACGACGGCGTTGATGTATTGTCTCTATCTTTGGGGAAGAGTGCTCCTCTGTTTGCGGAGGTGGATGAAGAGAACGTGGTTGCGATTGGGTCATTCCGGGCAAACATGAGGAATATTTCGGTGGTCTGTTCCGCCGGTAACGACGGGCCTTCTGCAGAGACGGTGATCAACACTTCCCCTTGGATCTTGAGTGTTGCTGCAACTTCTATTGACAGAACTTTTTTGGGCTCTATTACTCTTGGAAATAACAACACTTTTGTGAGTCAAACCCTATACACTAGAAAGGAGATTGGATATAGTGGCTTGGTATATCCAAGGTCTGGGTTGAACCAGATCATCGCAGGGTTATGTGATTCAATAACATTAGTGAATGGTAGTAATTGGATGAGTGGAAAAGTGGTTCTCTGCTTCAGCACAATGGTGGGGATGAATCCAATAGCCATAACAAGAGCTGTGGAAGCTGTGAAAGCAGGAAATGGCTTGGGGTTAATTGTTGCTAGGCATCCTGATGATATCTGGTTTACATGTGACAATGATTTCCCTTGTTTTCAAGTCAATTTTGAAGTTGGCACCAAAATCTTCTATTACATCCGGGCAACAAGTTCTCCAATTGTAAAGCTGAGCCCTTCAAGGACCATCACAGGCAACCCCATTTCAGCACATATAGCATACTTCTCATCAAGAGGTCCCAATTCTGTTGCACCAGCAATTCTGAAGCCAGATATTGGTGCTCCAGGTGTGGCAATATTAGTAGCCACTTCCCCATTTGACATAACAAATGATGGAGGTTTTACCATACAAACAGGAACTTCCATAGCAACCCCTCATATTTCAGCCATTGTTGCTCTTCTCAAGTCACTTCATCCTACTTGGTCTCCTGCTGCCATCAAATCTGCCATTATCACAACTGCATGGAGCAGGCATCCTTCTGGGGTACCAATTCTGGCTGAAGGATCTCCACATAAACTTGGCAATCCATTTGACTATGGAGGAGGAATTGTTAACCCAAATGCAGCTGCAAACCCAGGCCTCATTTACGACATGTCGACTTCCGATTACATCTCTTACTTTTGCTCAATGGGCTACAAAAACTCTGCCATATCTTTTCTAACAGAGCAAAAAACAGAGTGCCCATCAAAACCCCAAATTTCTTTGTTGGATCTTAATCTACCTTCCATAACACTCCCAGCACTTACAAACTCAACCACTATCACTCGAACTGTCACTAATGTTGGTAATTTGACCTCCATTTACAAAGCTTTGATTCACCCTCCAATGGGAATCAATGTCACTGTGGACCCTCTTGTCTTACTCTTCAATGCTACTGTCACCAATTTGTCCTTCAAGGTTATGATTTCAACCCTTTTAGAGATGGATTATGGTTTTTCTTTCGGAGCTATCATTTGGAGTGATGGAGTGCATCTTGTTAAAACTCCATTGTCTGTTAGAACTCAAATTCTACATTCTTCTACGTAG 2529 44.44 MMVVAISLEQLNQRMRISLQVPKLNHIYKHFNIVMPCSIHVFLHINQTNLSNTLLSISNFSRQNNMKNRRCFLLALFFYALIFEKLTVKPEASGKLLHIVHLEHNQHDPNSSIVEIHHNFLSTLLGSKKKASKSMVYSYTHAFSGFAAKLTKSQAYQLSEMRGVVRVLPNVLYDLHTTRSWDFLGLSPSPSPSNLLQMSNLGDGIIIGVVDTGIWPESEAFDDQGLGPVPVRWKGECQSGEQFKATRDCNRKIIGAKWYVDGFIAEFGEFNRSAVKEFMSPRDSNGHGTQTASTAAGSFVKNVSYRGLGGGTARGGAPAARLAVYKACWSLPGGGGQCSAADVLKGMDDAVHDGVDVLSLSLGKSAPLFAEVDEENVVAIGSFRANMRNISVVCSAGNDGPSAETVINTSPWILSVAATSIDRTFLGSITLGNNNTFVSQTLYTRKEIGYSGLVYPRSGLNQIIAGLCDSITLVNGSNWMSGKVVLCFSTMVGMNPIAITRAVEAVKAGNGLGLIVARHPDDIWFTCDNDFPCFQVNFEVGTKIFYYIRATSSPIVKLSPSRTITGNPISAHIAYFSSRGPNSVAPAILKPDIGAPGVAILVATSPFDITNDGGFTIQTGTSIATPHISAIVALLKSLHPTWSPAAIKSAIITTAWSRHPSGVPILAEGSPHKLGNPFDYGGGIVNPNAAANPGLIYDMSTSDYISYFCSMGYKNSAISFLTEQKTECPSKPQISLLDLNLPSITLPALTNSTTITRTVTNVGNLTSIYKALIHPPMGINVTVDPLVLLFNATVTNLSFKVMISTLLEMDYGFSFGAIIWSDGVHLVKTPLSVRTQILHSST 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 20617322 20622258 + ClG42_07g0081300.10 Clacu07g0813 253411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0813 842 Gene3D - 422 565 - -
Clacu07g0813 842 ProSiteProfiles Serine proteases, subtilase domain profile. 180 691 - -
Clacu07g0813 842 Pfam Fibronectin type-III domain 738 833 IPR041469 -
Clacu07g0813 842 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 98 830 IPR045051 -
Clacu07g0813 842 CDD PA_subtilisin_like 428 558 - -
Clacu07g0813 842 Gene3D Peptidase S8/S53 domain 204 704 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0813 842 FunFam Subtilisin-like protease SBT5.3 87 176 - -
Clacu07g0813 842 ProSitePatterns Serine proteases, subtilase family, serine active site. 620 630 IPR023828 -
Clacu07g0813 842 PRINTS Subtilisin serine protease family (S8) signature 202 221 IPR015500 -
Clacu07g0813 842 PRINTS Subtilisin serine protease family (S8) signature 283 296 IPR015500 -
Clacu07g0813 842 PRINTS Subtilisin serine protease family (S8) signature 619 635 IPR015500 -
Clacu07g0813 842 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 84 176 IPR037045 -
Clacu07g0813 842 Gene3D - 708 836 - -
Clacu07g0813 842 Pfam Subtilase family 202 660 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu07g0813 842 FunFam Subtilisin-like protease SBT1.5 204 431 - -
Clacu07g0813 842 FunFam Subtilisin-like protease SBT1.5 708 836 - -
Clacu07g0813 842 SUPERFAMILY Subtilisin-like 73 760 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu07g0813 842 Pfam Peptidase inhibitor I9 98 176 IPR010259 -
Clacu07g0813 842 CDD Peptidases_S8_3 173 656 IPR034197 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1302 Clacu-Chr1:23399807 Clacu07g0813 Clacu-Chr7:20617322 2.30E-146 dispersed
Clacu07g0813 Clacu-Chr7:20617322 Clacu10g0386 Clacu-Chr10:4872166 2.00E-135 dispersed
Clacu07g0813 Clacu-Chr7:20617322 Clacu09g0110 Clacu-Chr9:1017185 5.40E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0813 - - - 0.0