Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0875 ATGGCTGAATCTCGGAGCTTACTCTTTGCATTTGCTCTTCTTGCCTTGGGTTCGGTTGCTTTCTCTCACAACATCGGCGGCGGCTATTATTTGTATCCTCAATTCTATGACCATTCTTGTCCGAGAGCTCAAGAGATAGTGAAGTCCATAGTGGCTAAGGCTTTTGCAAAGGAAGCTCGTATTGCTGCTTCCTTGCTTAGGCTTCATTTCCATGATTGTTTTGTTAAGGGCTGTGATGCGTCACTGTTGTTAGATAGCAGTGGGAAAATAGCCAGTGAGAAAAGGTCAAATCCAAACAGAAACTCTGCTAGAGGCTTTGAAGTCATTGATGAGATCAAATCTGCCTTGGAAAAGGAGTGTCCTCAAACTGTTTCTTGTGCTGATATTTTGGCCATTGCTGCTAGAGACTCCACAGTCATAACTGGAGGACCCAGTTGGGAAGTTCCACTTGGAAGAAGGGACTCAAGAGGAGCAAGTCTAAGTGGCTCTAACAATGACATTCCTGCTCCAAACAACACTTTCCAAACCATTCTCACTAAGTTCAAAAGACAAGGCCTTGATATTGTTGATCTTGTTGCTCTTTCAGGAAGCCACACCATTGGAAATTCCCGATGCACCAGCTTCAGGCAACGTCTCTACAACCAATCTGGCAATGCCCAGCCCGATCCCTCCCTCGATCCATCATATGCCGCTGAATTGCGCAAGGGATGCCCGAGATCAGGGGGTGACCAGAACCTGTTTTTCTTGGACTTTGTGAGCCCTACCAAGTTCGACAACTACTACTTTAAGAATCTTTTGGCTGCAAAGGGTCTGCTGAACTCAGATCAAGTTCTTTTGACAAAGAACTTGCAATCAGCGGAATTGGTGAGGACATATGCAGAGAATTCTGAGATCTTTTTTGAGCAATTTGCTAAGTCCATGGTTAAGATGGGAAACATTTCTCCTCTCACTGGTTCAAGGGGAGAGATCAGAAAGCACTGCAGAAAAGTTAACAAAAATTAG 1002 44.71 MAESRSLLFAFALLALGSVAFSHNIGGGYYLYPQFYDHSCPRAQEIVKSIVAKAFAKEARIAASLLRLHFHDCFVKGCDASLLLDSSGKIASEKRSNPNRNSARGFEVIDEIKSALEKECPQTVSCADILAIAARDSTVITGGPSWEVPLGRRDSRGASLSGSNNDIPAPNNTFQTILTKFKRQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQSGNAQPDPSLDPSYAAELRKGCPRSGGDQNLFFLDFVSPTKFDNYYFKNLLAAKGLLNSDQVLLTKNLQSAELVRTYAENSEIFFEQFAKSMVKMGNISPLTGSRGEIRKHCRKVNKN 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 21869346 21871418 + ClG42_07g0087500.10 Clacu07g0875 253473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0875 333 Gene3D - 35 331 - -
Clacu07g0875 333 CDD secretory_peroxidase 31 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu07g0875 333 SUPERFAMILY Heme-dependent peroxidases 31 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PANTHER PEROXIDASE 72-RELATED 15 330 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 Gene3D Peroxidase, domain 2 168 311 - -
Clacu07g0875 333 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Clacu07g0875 333 Pfam Peroxidase 47 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Clacu07g0875 333 FunFam Peroxidase 34 176 - -
Clacu07g0875 333 FunFam Peroxidase 168 310 - -
Clacu07g0875 333 ProSiteProfiles Plant heme peroxidase family profile. 30 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g0875 333 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2418 Clacu-Chr2:37159050 Clacu07g0875 Clacu-Chr7:21869346 1.20E-81 dispersed
Clacu02g2425 Clacu-Chr2:37221016 Clacu07g0875 Clacu-Chr7:21869346 1.80E-74 dispersed
Clacu02g2426 Clacu-Chr2:37230107 Clacu07g0875 Clacu-Chr7:21869346 6.20E-69 dispersed
Clacu04g0934 Clacu-Chr4:23596353 Clacu07g0875 Clacu-Chr7:21869346 7.50E-41 dispersed
Clacu07g0875 Clacu-Chr7:21869346 Clacu11g0725 Clacu-Chr11:7114727 1.30E-80 dispersed
Clacu09g2287 Clacu-Chr9:37639997 Clacu07g0875 Clacu-Chr7:21869346 4.60E-58 dispersed
Clacu10g2013 Clacu-Chr10:33610508 Clacu07g0875 Clacu-Chr7:21869346 2.30E-55 dispersed
Clacu05g2761 Clacu-Chr5:35037313 Clacu07g0875 Clacu-Chr7:21869346 1.20E-62 transposed
Clacu06g0427 Clacu-Chr6:5056681 Clacu07g0875 Clacu-Chr7:21869346 2.50E-82 transposed
Clacu07g1733 Clacu-Chr7:32035101 Clacu07g0875 Clacu-Chr7:21869346 4.90E-80 transposed
Clacu09g1264 Clacu-Chr9:13352646 Clacu07g0875 Clacu-Chr7:21869346 6.60E-84 transposed
Clacu01g2054 Clacu-Chr1:32336989 Clacu07g0875 Clacu-Chr7:21869346 4.40E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0875 K00430 - csv:101223204 598.201