Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu07g0891 | ATGACATTCCATTTTCCGTCAATGGATTTCATTTTGCAAAATATTCAGAGTTCGCCATTGCTATTCTTCATTGTGCCTCTAGTGCTCCTTCTTCTCACTTCTGTTCTCCGGCGGCCGCCGCGGCTGCCACTCCCTCCGGGGCCTAAAGGGCTACCCATCATCGGCAATATGCGGATGATAGACCAACTCACCCACCGTGGACTTGCCGCCATGGCCAAACGGTATGGCGGAATCTTCCACCTCCGCATCGGCTTCCTCCACATGGTTGCCATTTCCGATCCCGATGTTGCTTGGAATGTTCTTCAGGTACAAGATCTAGTGTTTTCAAACCGTCCAACAACCAAAGCCATAAAGTACTTAACATACGAGCGAGCCGACATGGCATTCGCTCACTACGGCCCATTCTGGCGACAAATGAGAAAAGTATGTGTCATGAAATTATTCAGCCGCAAACGAGCCGAGTCATGGGCATCGGTTCGACATGAGGTTCATAATCTCATCACCACAATTGCCAACAACACACAAGCCCCTCTCAACCTTGGCCACTTAATCTTCACAATGAGCATTAATATAATTTACAGGGCTGCCTTTGGGACAATCGAACCACAACACCAATCCCAATTCATCAAAATACTGGAAGAATTCTCCAAGCTTTTTGGAGCTTTCAATGTTGCTGATTTTTTCCCTTGTCTTGCCTGGATCGATCCTCAAGGTCTCAATCCTAGACTTGTCGAGGCTCGTCGATCTCTCGACTGGTTCATCGATAGAATCATTGACCAACATTTGGTGAACAGGAGGAAAATAGAGGAAATTGATAAGGACATGGTTGATGAGCTACTAGCTTTCTATAATGAAGATGGCGGAGGAAGTAACGAAAGTGAGTTAGAGGATTTGCAATTGCAAAATGCTATCAAACTCACTAGAGACAATATCAAAGCCATCATAATGGACGTAATGTTTGGCGGCACAGAAACAGTTGCCTCCGCCATAGAATGGGCTATGGCGGAGCTCATGAAGAACCCCGATGACCTCAACAAACTTCAACAAGAACTCACCGCTGCCGTCGGCCTTCACCGGTGTCCACAAGAATCCAACTTAGAGAATCTAACATACCTAAAATGCATTCTCAAGGAAACTCTCCGGCTCCACCCACCCATTCCGCTACTCCTCCACGAGACGGCCGCCGAAACGGAACTCGCCGGCTACCGGATTCCTGCGAAGTCCCGCGTCTTCATCAACGCATGGGCACTCGGGCGGGACGAGAAGTCGTGGGTGGACCCAAACAGTTTCCGGCCGGCGAGGTTCGAAAGCAACGGCGCCGCCGACTTCAAAGGCGGAAACTTTGAGTTCATTCCATTCGGGTCGGGCCGTCGGTCTTGCCCCGGAATGCAGCTGGGGATTTACACGGTGGAGATGGCGGTAGCGAATTTGGTACATTGTTTCCGGTGGGAGTTGCCGGAAGGGATGAAGTCCGGGGAGTTGGACATGAATGACGTTTTTGGACTCACTGCGCCCAGAGCGAGTCGACTCGTGGCTATTCCGTACAAGAGAGTTGTTTGTAGTTTGGACTGA | 1572 | 49.75 | MTFHFPSMDFILQNIQSSPLLFFIVPLVLLLLTSVLRRPPRLPLPPGPKGLPIIGNMRMIDQLTHRGLAAMAKRYGGIFHLRIGFLHMVAISDPDVAWNVLQVQDLVFSNRPTTKAIKYLTYERADMAFAHYGPFWRQMRKVCVMKLFSRKRAESWASVRHEVHNLITTIANNTQAPLNLGHLIFTMSINIIYRAAFGTIEPQHQSQFIKILEEFSKLFGAFNVADFFPCLAWIDPQGLNPRLVEARRSLDWFIDRIIDQHLVNRRKIEEIDKDMVDELLAFYNEDGGGSNESELEDLQLQNAIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKNPDDLNKLQQELTAAVGLHRCPQESNLENLTYLKCILKETLRLHPPIPLLLHETAAETELAGYRIPAKSRVFINAWALGRDEKSWVDPNSFRPARFESNGAADFKGGNFEFIPFGSGRRSCPGMQLGIYTVEMAVANLVHCFRWELPEGMKSGELDMNDVFGLTAPRASRLVAIPYKRVVCSLD | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 22297001 | 22300408 | - | ClG42_07g0089100.10 | Clacu07g0891 | 253489 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu07g0891 | 523 | CDD | CYP71-like | 74 | 510 | - | - | |
| Clacu07g0891 | 523 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | Gene3D | Cytochrome P450 | 33 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | FunFam | Cytochrome P450 84A1 | 37 | 516 | - | - | |
| Clacu07g0891 | 523 | PANTHER | CYTOCHROME P450 84A1-RELATED | 18 | 522 | IPR053062 | GO:0004497(PANTHER) | |
| Clacu07g0891 | 523 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | PRINTS | E-class P450 group I signature | 413 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu07g0891 | 523 | Pfam | Cytochrome P450 | 45 | 505 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0891 | 523 | SUPERFAMILY | Cytochrome P450 | 45 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu02g0502 | Clacu-Chr2:4595614 | Clacu07g0891 | Clacu-Chr7:22297001 | 9.10E-152 | dispersed | |
| Clacu07g0891 | Clacu-Chr7:22297001 | Clacu07g1463 | Clacu-Chr7:29277852 | 1.80E-97 | dispersed | |
| Clacu01g2071 | Clacu-Chr1:32464644 | Clacu07g0891 | Clacu-Chr7:22297001 | 6.80E-198 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu07g0891 | K09755 | - | vvi:100267863 | 682.559 |