Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0896 ATGCAAAAGAAAGAAAAAGAAACCCCACACCAAAAAGATCAGATCAAAACAAGTTTTTCCAAGACAAAGATGGAAGCCAATTTGGAGGTGCTGAGGGAAAGCTTCAAAAATGGAAGAACAAGGAGTTTCGAATGGAGGAAAAACCAGCTGAGTTCTCTGATTCAGTTCATGCATGACAAAGAAAACGTCATTTCTGAAGCCCTCTATCAAGATCTTGGCAAGCATCCTGTGGAAATTTTTCGAGATGAGGTTGGAATTGTTCTGAAATCTGCAAACAATGCTCTCTGCTCTTTACACAAATGGATGGCCCCTAAAAAGAAATCTGTGCCATTACTATTCTTCCCAGCAAAAGGAGAAGTTTTGTCTGAGCCATTTGGTCTGGTCCTCATAATTTCATCTTGGAATTTCCCCCTTTCTTTGGCATTGGATCCGTTAATTGGAGCGATATCAGCGGGCAACACAGCGGTTATAAAACCGTCGGAATATACTCCTGTTTTCTCCTCTTTTCTTGCTGCAACAATCCCTCTTTACCTTGATAATAAAGCTATCAAAGTTGTTGAGGGTGGAGCTGATGTTACTGAACAACTTCTACAGCACAAATGGGATAAGATCTTCTTCACTGGGAGTCAAAAGGTAGGTAGGATTGTGATGTCTGCAGCTGCAAAGCATCTAACTCCTGTTACTTTAGAGCTCGGGGGAAAATGTCCTGCAATCTTTGATTACTCCTCTGTCCATTCCAATATGAAGGTAGCAGCCAAGAGAATCGTTGGAGGAAAATGGGGGCTGTGCGCCGGGCAGGCATGCATAGGGATAGATTATGTGCTTGTGGAGGATAAGTTTGCTTCAGAATTGATCGAGTCATTAAAGCGAATACTCAAGAAGTTTTACGGTGAAAACTCAAAAAACTCAACGAGCATAGCCCGAATTGTTAATGAGAAAAATGTTGAAAGAATAAGCAATCTTCTCAAAGACCCCAAGGTTGCTGCTTCCATTGTCCATGGTGGCTCTATTGACAAAGAAAAACTCTTCATTGAGCCAACAATATTGTTGAATCCTCCAATCGACGCTGATATCATGACCGAAGAAATCTTCGGTCCCCTGCTACCGATAATCACATTGAACAAAATTGAAGAAAGCATTGAGTTCATCAACGCAAGACCAAAACCTCTTGCTCTCTATGCCTTCACGGGAGACGAAACTCTCAAGAAACGGATTTTATCCGAAACATCATCCGGAAGTGTCACATTCAATGATACCGTGGTTCAGTTTGTGTGTGATTCGCTACCATTCGGCGGTGTTGGTCAGAGCGGTTTCGGGAGTTATCATGGCAAGTATTCATTTGATACATTCAGCCATGAAAAAGCAGTGATGCAGAGAAGCTTTTTGATAGAACTCGACCCACGATATCCACCATGGAACGATTTCAAGCTCAAGTTCATTAGATTGGCATATCGATTCGACTATTTAGGGCTGGTGCTGCTCTTTTTGGGGTTAAAGAATATCAGAGCTATTGAAAGCTTCTTTTCCAAGGTTCCATGGATTCTTGTGAAGGGTCAACGTCACTCCGGTGGTGACACCATCAACGTGGTTAACTACATTATGGTGATTACTCCTCTACGACCTATCGTTCAAAGACCTCAGCCACCTGTTCCTCCACAACCCCAGAGAAGTACTATACTCAACCAAATCCTAGAATATCACTAA 1704 42.25 MQKKEKETPHQKDQIKTSFSKTKMEANLEVLRESFKNGRTRSFEWRKNQLSSLIQFMHDKENVISEALYQDLGKHPVEIFRDEVGIVLKSANNALCSLHKWMAPKKKSVPLLFFPAKGEVLSEPFGLVLIISSWNFPLSLALDPLIGAISAGNTAVIKPSEYTPVFSSFLAATIPLYLDNKAIKVVEGGADVTEQLLQHKWDKIFFTGSQKVGRIVMSAAAKHLTPVTLELGGKCPAIFDYSSVHSNMKVAAKRIVGGKWGLCAGQACIGIDYVLVEDKFASELIESLKRILKKFYGENSKNSTSIARIVNEKNVERISNLLKDPKVAASIVHGGSIDKEKLFIEPTILLNPPIDADIMTEEIFGPLLPIITLNKIEESIEFINARPKPLALYAFTGDETLKKRILSETSSGSVTFNDTVVQFVCDSLPFGGVGQSGFGSYHGKYSFDTFSHEKAVMQRSFLIELDPRYPPWNDFKLKFIRLAYRFDYLGLVLLFLGLKNIRAIESFFSKVPWILVKGQRHSGGDTINVVNYIMVITPLRPIVQRPQPPVPPQPQRSTILNQILEYH 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 22507523 22512114 + ClG42_07g0089600.10 Clacu07g0896 253494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0896 567 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 32 454 IPR016162 GO:0016491(InterPro)
Clacu07g0896 567 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 233 436 IPR016163 GO:0016620(InterPro)
Clacu07g0896 567 Pfam Aldehyde dehydrogenase family 19 456 IPR015590 GO:0016491(InterPro)
Clacu07g0896 567 FunFam Aldehyde dehydrogenase 233 436 - -
Clacu07g0896 567 SUPERFAMILY ALDH-like 25 472 IPR016161 GO:0016491(InterPro)
Clacu07g0896 567 FunFam Aldehyde dehydrogenase 32 243 - -
Clacu07g0896 567 PANTHER ALDEHYDE DEHYDROGENASE 22 497 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2374 Clacu-Chr2:36755618 Clacu07g0896 Clacu-Chr7:22507523 1.90E-162 dispersed
Clacu07g0896 Clacu-Chr7:22507523 Clacu11g1761 Clacu-Chr11:28824151 2.60E-134 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0896 K00128 - csv:101221321 868.226