Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu07g0913 | ATGTTTCACTTTCACACTCAGCTTATACTCTGTTTTCTCCCTTCTCTTTTAGCTCTCTTCCTCTTCCTCATTCTGCTCCGACGGAACAGAAATGCCCTCCATCTTGATCTTCCTCCCGGAACCATGGGCTGGCCTTTTCTCGGCGAGACCATCGCCTATCTCCGCCCCTATTCCGCCACCACCATCGGAGCTTTCATGGAGAGTCACATCAAGAGATATGGTAAAGTGTACAAGTCGAACCTGTTCGGAGAGCCGACGGTGGTGTCGGCCGACGCCGGACTGAATCGGTACATCCTGCAAAATGAAGGGCGGCTGTTTGAATGCAGCTATCCGCGGAGCATCGGTGGGATCCTTGGGAAATGGTCGATGTTGGTTACCGTCGGCGACATGCACCGGGATATGAGAATGATATCTCTGAACTTTCTGAGTCAGAGTAGGCTCAAGAATCATCTCTTGAAGGAGGTTGAGAACCAGACGCTTCTCGTCCTCCGTTCTTGGAAAGATTCTTCCACGTTTTTGGCGCAGGACGAAGCCAAAAAGTTTACTTTCAATTTAATGGCGAAACACATCATGAGTTTGGATCCATGGAAGTTGGAGACGGAGATGTTGAAGAAGGAGTATGTGACTTTCATGAAAGGAGTGATTTCTCCGCCGCTGAATCTTCCCGGAACGCCGTACAGACGAGCTTTGAAGTCTCGGTCGACGATCTTGAAGTTCATCGAACGGAAAATGGAGGAACGGAAGTTGAAAATGGAAGCCGAAGGCGGTGATTTCGAGGATGATGATCTACTCGGTTGGGCATTGAAGCACTCAAATCTCTCAACGGAGCAAATCCTGGACCTGATTCTTAGCTTGCTGTTCGCCGGCCACGAGACATCTTCGGTCGCCATAGCTTTAGCCATCTTCTTCCTCTCTGGCAGTCCGGCTGCCGTTCAACAGTTGACTGAAGAACACCTGGAAATCTCCAGAAGCAATAAGCGATTGGGAAAGACGGAATTGGATTGGGATGATTACAAGAAAATGGAATTCACGCAAAGTGTGATTAACGAGACGCTTCGGCTTGGAAACGTGGTGAGATTTCTTCATAGAAAGGCACTGAAGGATGTACGGTACAGAGGTTATTTCATTCCACGTGGATGGAAAGTGCTTCCAGTCATTTCTGCAGCGCATTTGGATCCTCTAGTTTTTGACCAACCTCATCACTTTAATCCATGGAGATGGCAGCAAATGAATGGATCGTCATTAGGTAACATGAGCACGACGATAACCAATAATTTCATGCCATTTGGAGGAGGACCGCGATTATGCACTGGTTCAGAACTAGCAAAGCTTGAAATGGCCATTTTTATACATCATTTGGTATTGAACTACCAATGGGAATTGGTAGGTTCAGATCAAGCTTTTGCTTACCCTTTTGTTGACTTCCCTAAAGGTCTACCAATCAGAATCCGCCATCGCACTCTCGTGTAA | 1470 | 47.41 | MFHFHTQLILCFLPSLLALFLFLILLRRNRNALHLDLPPGTMGWPFLGETIAYLRPYSATTIGAFMESHIKRYGKVYKSNLFGEPTVVSADAGLNRYILQNEGRLFECSYPRSIGGILGKWSMLVTVGDMHRDMRMISLNFLSQSRLKNHLLKEVENQTLLVLRSWKDSSTFLAQDEAKKFTFNLMAKHIMSLDPWKLETEMLKKEYVTFMKGVISPPLNLPGTPYRRALKSRSTILKFIERKMEERKLKMEAEGGDFEDDDLLGWALKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLSGSPAAVQQLTEEHLEISRSNKRLGKTELDWDDYKKMEFTQSVINETLRLGNVVRFLHRKALKDVRYRGYFIPRGWKVLPVISAAHLDPLVFDQPHHFNPWRWQQMNGSSLGNMSTTITNNFMPFGGGPRLCTGSELAKLEMAIFIHHLVLNYQWELVGSDQAFAYPFVDFPKGLPIRIRHRTLV | 489 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 22881363 | 22886441 | - | ClG42_07g0091300.10 | Clacu07g0913 | 253511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu07g0913 | 489 | SUPERFAMILY | Cytochrome P450 | 31 | 486 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | P450 superfamily signature | 427 | 436 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | P450 superfamily signature | 436 | 447 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | P450 superfamily signature | 288 | 305 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | Pfam | Cytochrome P450 | 38 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | E-class P450 group I signature | 345 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | E-class P450 group I signature | 426 | 436 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | E-class P450 group I signature | 385 | 409 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | E-class P450 group I signature | 436 | 459 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | E-class P450 group I signature | 70 | 89 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | PRINTS | E-class P450 group I signature | 277 | 294 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g0913 | 489 | CDD | CYP90-like | 69 | 483 | - | - | |
| Clacu07g0913 | 489 | FunFam | Cytochrome P450 90B1 | 26 | 485 | - | - | |
| Clacu07g0913 | 489 | PANTHER | CYTOCHROME P450 26 | 36 | 457 | - | GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Clacu07g0913 | 489 | Gene3D | Cytochrome P450 | 26 | 484 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu06g0396 | Clacu-Chr6:4711518 | Clacu07g0913 | Clacu-Chr7:22881363 | 8.30E-81 | dispersed | |
| Clacu07g0414 | Clacu-Chr7:4793282 | Clacu07g0913 | Clacu-Chr7:22881363 | 2.80E-94 | dispersed | |
| Clacu07g0913 | Clacu-Chr7:22881363 | Clacu09g1984 | Clacu-Chr9:34706283 | 7.30E-85 | dispersed | |
| Clacu07g0913 | Clacu-Chr7:22881363 | Clacu09g0062 | Clacu-Chr9:628159 | 5.20E-91 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu07g0913 | K09587 | - | csv:101211854 | 893.264 |