Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0946 ATGTCGGTCGCTAACGCCGACACATCTCTGACTATGTCGGACGTCTCGACAGTCGAGAAAAGCAGCCCGGCGGAGAGGGCTGAGTGGGTGGCAAACCCACCAGAGCCGCCAGGGATATGGCGAGAGGTAATCGAGTCTCTCCGTGACACCATGTTTCCCGATCCGAACAAGCTTTCGTCCCTGAAGAACAAGACCGGAACTGCGGTGGTTGGAAGCCTCTTGCAGGGTGTGTTCCCTATCCTCTGCTGGGGACAGAGCTACAATCTGGGGAAGTTCAAGAATGACATCTTGGCTGGTTTGACCCTGGCTAGCCTCTGCATTCCCCAGAGTATTGGATATGCAAATCTGGCTAAACTTGATCCTCAATATGGGCTGTATACAAGCATTGTGCCACCCCTGGTTTATGCAGTGTTGGGAAGTTCGAGGGAAATAGCAATCGGACCGGTGGCCATAGTATCTCTACTTTTGCCGTCAATGATTCAGAAAATTCAAGATCCCGCCGCCGACCCTCTTGCCTACAAAAACCTTGTGTTCACCGTCACTTTCTTCGCCGGAATCTTTCAGGCCGCCTTTGGACTCTTTCGGCTGGGGTTTTTGGTGGATTTTCTGTCACATGCTGCCATAGTTGGGTTCATGGGTGGAGCTGCCATTGTAATTGGGCTTCAACAGCTCAAAGGATTGCTTGGCATCACTCACTTCACTAACAAAACTGATATTCTATCTGTTATGGAAGCTGTGTTTGGATCATTCCATCATCATAATGATCAATGGAATCCCTTCAACTTCATCATTGGCTCTTCATTCCTGTCCTTCATCCTCATCACCAAATTATTGGGGAAGAAGTACAAGAAAGTATTCTGGTTAGCTGCCATAGCTCCACTGTTGTGTGTAATCCTATCGACGCTTTTGGTGTTCCTCACAAGAGCCGACCGGCAGGGTGTGAAGATCGTCAAACGAGTCCCCGCCGGCCTGAACCCCATCTCGGCTCGCCACATCCAAATCCACTCCCCTCACTTCTCCCAAATCCTCAACGCCGCCTTCATCGTGGCCGTCATAGCCCTCACGGAGGCCATTGCTGTGGGGAGGTCACTGGCGTCCATGAAAGGTTACAACATTGATGGGAACAGAGAAATGGTTGCGTTAGGCTTCATGAACCTAGCAGGCTCTCTCACTTCTTGCTACGCAGCAACAGGTTCTCTGTCACGGTCGGCGGTTAATTTCAGTGCCGGGTGCGAGACCGTGGTTTCGAACGTGGTGATGGCGGTGACGGTGATGATATCATTGGAGATGTTCACCAAGCTCCTCTACTTCACTCCCAACGCCATTCTTGCTTCCATTATTCTATCTGCACTTCCAGGCCTCATTGATCTTCACAAAGCTTATAATATCTGGAAGATCGACAAGCTCGACTTCTTGGCTTGCCTTGCAGCTTTTCTTGGTGTTCTCTTTCTCTCCGTCGAATTCGGCCTCCTCCTTTCGTTAGTGATATCATTTGCAAAGATAATAGTAATCTCAATCAAACCTGGGACTGAGATATTGGGAAAACTCCCTGGAAGTCATACCTTCTGTGATATTCATCAATATCCAATGGCTCTCAATACTCCTGGAGTCCTCATCATCCGTGTTAAATCTGGCTTACTTTGCTTTGCAAATGCCAACTTCGTCAAAGATAGGATTCTGAGGTTCATCAGCAGCCAAGATGATGCATCAGCAAAGAGAATCACTCACTTCCTAGTCATTGATCTCTCCAACTTAATGAACATTGACACTTCAGGAATTGCTTCTCTTGAAGAGCTGCAGAATAGTTTGGCGGCCAGTGGAATAGAGTTGGCCATTGCAAATCCAAAGTGGCAAGTGATTCACAAGCTAAAGGTAGCAAATTTTGTTGCCAAGCTCAAAGGGAGGGTGTTCTTGAGTGTTGGGGAAGCTGTGGATGCTTGCCTTACAGCTAAAATGGGAGCTATCTAA 1968 48.37 MSVANADTSLTMSDVSTVEKSSPAERAEWVANPPEPPGIWREVIESLRDTMFPDPNKLSSLKNKTGTAVVGSLLQGVFPILCWGQSYNLGKFKNDILAGLTLASLCIPQSIGYANLAKLDPQYGLYTSIVPPLVYAVLGSSREIAIGPVAIVSLLLPSMIQKIQDPAADPLAYKNLVFTVTFFAGIFQAAFGLFRLGFLVDFLSHAAIVGFMGGAAIVIGLQQLKGLLGITHFTNKTDILSVMEAVFGSFHHHNDQWNPFNFIIGSSFLSFILITKLLGKKYKKVFWLAAIAPLLCVILSTLLVFLTRADRQGVKIVKRVPAGLNPISARHIQIHSPHFSQILNAAFIVAVIALTEAIAVGRSLASMKGYNIDGNREMVALGFMNLAGSLTSCYAATGSLSRSAVNFSAGCETVVSNVVMAVTVMISLEMFTKLLYFTPNAILASIILSALPGLIDLHKAYNIWKIDKLDFLACLAAFLGVLFLSVEFGLLLSLVISFAKIIVISIKPGTEILGKLPGSHTFCDIHQYPMALNTPGVLIIRVKSGLLCFANANFVKDRILRFISSQDDASAKRITHFLVIDLSNLMNIDTSGIASLEELQNSLAASGIELAIANPKWQVIHKLKVANFVAKLKGRVFLSVGEAVDACLTAKMGAI 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 23482694 23491180 - ClG42_07g0094600.10 Clacu07g0946 253544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0946 655 Gene3D STAS domain 507 650 IPR036513 -
Clacu07g0946 655 NCBIfam sulfate permease 79 638 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu07g0946 655 CDD STAS_SulP_like_sulfate_transporter 528 638 - -
Clacu07g0946 655 MobiDBLite consensus disorder prediction 1 20 - -
Clacu07g0946 655 ProSiteProfiles STAS domain profile. 544 647 IPR002645 -
Clacu07g0946 655 MobiDBLite consensus disorder prediction 1 33 - -
Clacu07g0946 655 FunFam Sulfate transporter 31 507 650 - -
Clacu07g0946 655 PANTHER SULFATE TRANSPORTER 68 648 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu07g0946 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Clacu07g0946 655 Pfam STAS domain 528 643 IPR002645 -
Clacu07g0946 655 Pfam Sulfate permease family 92 476 IPR011547 GO:0016020(InterPro)
Clacu07g0946 655 SUPERFAMILY SpoIIaa-like 534 647 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0946 Clacu-Chr7:23482694 Clacu11g1713 Clacu-Chr11:28382739 3.60E-180 dispersed
Clacu07g0946 Clacu-Chr7:23482694 Clacu03g0891 Clacu-Chr3:11037732 7.70E-223 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0946 K17469 - csv:101213063 1108.59