Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g0989 ATGGCGACCGGCTTTCTGCTATCACTCTTCTTCTTCACTCCGCCATTAGGAGAGGTGACCCTTCATCTTCCAGCGATGAAACAGCGGCTTCGTTTTGGTTGCGCTGTCAGTTCTGAAACAATGTTCATCGATGGATCTATGTTTCTCTCTATCCCTTTTCTTGCTTTCTACTTAACCTTCTATTTCTACTCCCTCTCACAATCCCATGCCGGACGCTATCTGCTGCTTCTCCTTTGCATTCTGCAACGGAAGGTGAAACATGTTACAAGCAATGGAGAACAGGTACACGTAAAGACAGGAAAATCCAATGGTTTCCCTAATGGGAAGAGTGAAGATCTAGCTGCAACTCGAATTCAAAATGCATTTCGCGCATTTACGGCCAGAAAGGATGTACATAATTCGAAAGTGCCAGAGAGATGCCAGGATCTAATTCAAGGTGGAATGGCTACAAAACAAGTGTTAAGCTTCATTCATTCATGGAGCAGAATGCAGCAAGAAATTAGAGCACGTAGACTCTGTATGGTCACGGAATATCGAGTCAAGCAAAAGAAACTGGAAAATCAGCTGAAGCTTGAGGCTAAAATTCATGAACTTGAGGCAGAATGGTGCGGTGGGTCCGAAACAAAGGAGGAAATACTTTTCAAGATTCAGCAACGAGAAGAAGCTGCTGTAAGACGGGAGCGGGCTATGGCTTATGCATTCTCTCATCAGTGGAGGGCCAATTCCATCTTAGATCTGAGCCCGGCTTCATACAGCCTTGATAAAGAAAACTGGGGATGGAGCTGGAAGGACAGATGGATTGCTGCTCGGCCATGGGAGATCCGAGCTAATACTCATCCCACCATTCCAAAGAAGGTGCAGACGAAACAAACAAGCAAACTCAATAAAGTGGCATATCAATCGGGGTCGAAGGTCTCAAACTTAGCCAGATATTCTTCGTCGAACAGCAAGGGGAGTTCAAAGGCCAGAAATTCTGCTATACCCAACAGCTGA 993 45.52 MATGFLLSLFFFTPPLGEVTLHLPAMKQRLRFGCAVSSETMFIDGSMFLSIPFLAFYLTFYFYSLSQSHAGRYLLLLLCILQRKVKHVTSNGEQVHVKTGKSNGFPNGKSEDLAATRIQNAFRAFTARKDVHNSKVPERCQDLIQGGMATKQVLSFIHSWSRMQQEIRARRLCMVTEYRVKQKKLENQLKLEAKIHELEAEWCGGSETKEEILFKIQQREEAAVRRERAMAYAFSHQWRANSILDLSPASYSLDKENWGWSWKDRWIAARPWEIRANTHPTIPKKVQTKQTSKLNKVAYQSGSKVSNLARYSSSNSKGSSKARNSAIPNS 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24327790 24333993 + ClG42_07g0098900.10 Clacu07g0989 253587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g0989 330 ProSiteProfiles IQ motif profile. 111 139 - -
Clacu07g0989 330 MobiDBLite consensus disorder prediction 302 330 - -
Clacu07g0989 330 Coils Coil 181 201 - -
Clacu07g0989 330 PANTHER IQ-DOMAIN 5-RELATED 102 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g2430 Clacu-Chr1:34862051 Clacu07g0989 Clacu-Chr7:24327790 1.80E-55 dispersed
Clacu07g0989 Clacu-Chr7:24327790 Clacu09g2069 Clacu-Chr9:35494288 1.50E-25 dispersed
Clacu07g0989 Clacu-Chr7:24327790 Clacu05g2280 Clacu-Chr5:31155807 6.70E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g0989 - - - 0.0