Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1014 ATGACGTCGGGGACGAGGCTACCGACATGGAGGGAGCGGGAGAACAACAAGAGAAGAGAGAGAAGGAGAAGAGCTATTGCGGCAAAGATCTTTGCCGGACTCAGGATGTACGGGAACTACAAGCTTCCCAAGCATTGCGACAACAATGAGGTCCTTAAAGCTCTCTGCAATGAGGCGGGATGGACCGTCGAACCTGATGGTACCACTTACCGTAAGGGATGCAAGCCAATTGAACGTATGGATGTGGTTGGTGGATCAGCAGCTGCAAGCCCGTACGCATCTCACCAACCAAGTCCTTGTGCTTCCTTCAATCCAAGCCCCGGTTCATCTTCTTTTCCAAGTCCAGCATCATCCTCATATGTTGGTAATCCGAATGCTGACGGAAGTTCGCTTATACCCTGGCTCAAAAACCTTTCAACGTCATCATCTTCAGCATCCTCGTCTAAACTCCCAAATCATTATATTCATGGAGGTTCCATCAGTGCTCCGGTAACTCCTCCTCTGAGTTCCCCAACTGCTAGAACGCCCCGACTCAAAGCTGACTGGGAAGACCAATCTGTCCTACCAGGATGGAGTGCACAATACTATTCCTCCCAGCCATCTTCTACTCCACCAAGTCCTGGGCGTCAGATTCTTCCCAATCCAGAATGGTTTGCTGGCCTTAGAATTCCTCAGGGTGGACCCAATTCTCCAACATTTAGTCTTGTCTCGACAAACCCATTTGGTTTCAAGGAAGCAGCAATGACTGGTGGAGGATCTCGCATGTGGACCCCTGGTCAAAGTGGGACCTGCTCTCCTGCCATTGCAGCAGGCTCCGATCACACTGCAGATATTCCAATGTCAGAAGTCATCTCTGATGAGTTCGCCTTTGGAAGCAATGCAGCAGGAATAGTGAAGCCATGGGAAGGAGAACGAATTCATGAAGAATGTGGTTCAGATGACCTAGAACTCACTCTTGGAAACTCAAGGACCAGGTAA 978 49.8 MTSGTRLPTWRERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPIERMDVVGGSAAASPYASHQPSPCASFNPSPGSSSFPSPASSSYVGNPNADGSSLIPWLKNLSTSSSSASSSKLPNHYIHGGSISAPVTPPLSSPTARTPRLKADWEDQSVLPGWSAQYYSSQPSSTPPSPGRQILPNPEWFAGLRIPQGGPNSPTFSLVSTNPFGFKEAAMTGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGSNAAGIVKPWEGERIHEECGSDDLELTLGNSRTR 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 24570088 24572819 - ClG42_07g0101400.10 Clacu07g1014 253612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1014 325 MobiDBLite consensus disorder prediction 88 122 - -
Clacu07g1014 325 MobiDBLite consensus disorder prediction 91 122 - -
Clacu07g1014 325 MobiDBLite consensus disorder prediction 1 20 - -
Clacu07g1014 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Clacu07g1014 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 139 IPR008540 -
Clacu07g1014 325 MobiDBLite consensus disorder prediction 193 213 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0742 Clacu-Chr3:8227563 Clacu07g1014 Clacu-Chr7:24570088 2.60E-123 dispersed
Clacu07g1014 Clacu-Chr7:24570088 Clacu08g1689 Clacu-Chr8:26508723 1.90E-44 dispersed
Clacu07g1014 Clacu-Chr7:24570088 Clacu01g1993 Clacu-Chr1:31866694 1.70E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48044 PF05687 BES1_N 1.30E-65 No_clan Clacu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1014 - - - 0.0