Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1054 ATGAGAAACACCAAAATCAGTTTATCCCTCTCTCACCTACGAGAGTCTGAAGAAGTGGGTGCCTGGAAGCTTAACACTGATGTGTCTTGGAGCGAGTCCAAGCTGCGAGAGGGACTGTCTTTGAACCTTCGAGACCACCGAGCCTCAGTCACCGGGCGGGGCCGAGGCCAACTCTGGTTTCTTCTCATCGGGGCATATCGTTGTTTGATGTCGAGCAGCAACATGGGGCTGCGTTTTATGTCATACCCACGGAAGAATCTGCTGACGAAGTTCTCGTCTCTGTTCCCAATAAGTGCAATTCCCAGTATCAAGACTGTCAAAGGGGGTTTCTCTTGCAGTTGTAGTGTTGGTTGTCAATTCAACTTGGATGATTTTAGCAGCAAGAAGAGGCATTTGGAAAGAGTTCACTCCACCAATTCAAATGGGAAGTTTAGCAATAAGCAGTTTATTAGTGTTGATCCACAACTTTACGAGTATATTCTCTCCAATGTTCGAGAGCCTGAGATCCTGGGGAAACTTCGTGAGGAGACTGCCTCAATGCGTGGTAGCAAAATGCAGGTATCCCCCGATCAAGCACAACTTCTTGCAATGCTTGTTCAGATTCTTGGTGCTAAGAGGTGCATCGAAGTGGGTGTTTACACTGGATATTCGTCTTTGGCCGTAGCACTAGTCCTGCCAGAATCAGGGCATTTAGTTGCCTGTGAAAGAGATCTCAAATACCTTGAGGTTGCTAAAAGATATTATGAACTTGCCGGTGTTTCACACAAAGTGGATATGAGACATGGACTTGCAGCAGATACACTCAAATCACTTATTTCAAATGGTGAAGCTTGCAGCTATGATTTTGCCTTCATCGATGCCGAGAAGAGGATGAATGAGGAATACTTCGAACTGCTCCTACAATTGGTCAGGGTTGGAGGCTTAATTGTGATCGATAATGTCCTTTGGTACGGAAAAGTAGCTGACCCAATGGTTAATGACAAGAAAACCGATAGCATCAGGAGATTGAATAAAAAGATAATGGAAGACAATCGAGTTGGGATAAGCATGGTACCTATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA 1092 44.96 MRNTKISLSLSHLRESEEVGAWKLNTDVSWSESKLREGLSLNLRDHRASVTGRGRGQLWFLLIGAYRCLMSSSNMGLRFMSYPRKNLLTKFSSLFPISAIPSIKTVKGGFSCSCSVGCQFNLDDFSSKKRHLERVHSTNSNGKFSNKQFISVDPQLYEYILSNVREPEILGKLREETASMRGSKMQVSPDQAQLLAMLVQILGAKRCIEVGVYTGYSSLAVALVLPESGHLVACERDLKYLEVAKRYYELAGVSHKVDMRHGLAADTLKSLISNGEACSYDFAFIDAEKRMNEEYFELLLQLVRVGGLIVIDNVLWYGKVADPMVNDKKTDSIRRLNKKIMEDNRVGISMVPIGDGMTICQKR 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25069923 25075194 + ClG42_07g0105400.10 Clacu07g1054 253652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1054 363 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 146 363 IPR002935 GO:0008171(InterPro)
Clacu07g1054 363 PANTHER O-METHYLTRANSFERASE-RELATED 150 362 IPR050362 GO:0008757(PANTHER)
Clacu07g1054 363 Gene3D Vaccinia Virus protein VP39 135 363 IPR029063 -
Clacu07g1054 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 157 363 IPR029063 -
Clacu07g1054 363 ProSitePatterns Zinc finger C2H2 type domain signature. 114 136 IPR013087 -
Clacu07g1054 363 Pfam O-methyltransferase 164 362 IPR002935 GO:0008171(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1054 Clacu-Chr7:25069923 Clacu11g1559 Clacu-Chr11:26702776 9.30E-37 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1054 - - - 0.0