Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1056 ATGGGAGAGGAAGTGAAGCTGTTAGATTTCTGGCCCAGCATGTTTGGGATGCGAGTTAGAATAGCGTTGGCTGAGAAGGGCGTGGCTTATGAGTACGTGGAAGAAGATCTGAAGAATAAGAGCCCTTTGCTTCTTCAAATGAACCCAATTCACAAGAAGATCCCTGTTCTTATTCACAATGGAAAACCCGTATGTGAATCTTCAATAATCGTTGAGTATATTGATGAAGTGTGGAAGGATAATGCTGCTTTGTTGCCTTCTGATCCTTATCAGAGAGCTCAGGCCAGGTTTTGGGTTGATTTCATCGATAAGAAGCTTTATGATGTTACAAGGAAGATATGGGGCAGCAAGGGAGAAGAGCATGAGACAGGAAAGAAGGAGGTAATAGAAATATTGAAGCAATTGGAAGAAGTTCTTGGAGAGAAGGATTACTTTGGAGGTGAAAGTTTGGGAATTGTAGACATTTCTTTGATTGGATTCTACAGTTGGTTTTATACCTATGAGACCATTGGCAACTTCAGCTTTGAGTCCGAGTGTCCAAAGATAGTGAGTTGGGGTAAGAGATGCTTGCAAAAGGAGAGTGTTGCCAAGTCCCTCCCTGACCCAAAAAAGATCTATGACTTTGTGGTTCAACTACAGAAAGCTTTGGGGGTTTGA 657 42.16 MGEEVKLLDFWPSMFGMRVRIALAEKGVAYEYVEEDLKNKSPLLLQMNPIHKKIPVLIHNGKPVCESSIIVEYIDEVWKDNAALLPSDPYQRAQARFWVDFIDKKLYDVTRKIWGSKGEEHETGKKEVIEILKQLEEVLGEKDYFGGESLGIVDISLIGFYSWFYTYETIGNFSFESECPKIVSWGKRCLQKESVAKSLPDPKKIYDFVVQLQKALGV 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25097989 25098818 + ClG42_07g0105600.10 Clacu07g1056 253654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1056 218 FunFam Tau class glutathione S-transferase 1 87 - -
Clacu07g1056 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Clacu07g1056 218 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Clacu07g1056 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Clacu07g1056 218 SFLD Main (cytGST) 2 216 - -
Clacu07g1056 218 Gene3D - 88 218 - -
Clacu07g1056 218 Pfam Glutathione S-transferase, C-terminal domain 117 192 IPR004046 -
Clacu07g1056 218 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Clacu07g1056 218 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Clacu07g1056 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Clacu07g1056 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Clacu07g1056 218 Gene3D Glutaredoxin 1 87 - -
Clacu07g1056 218 CDD GST_N_Tau 5 78 - -
Clacu07g1056 218 FunFam Glutathione S-transferase U20 88 218 - -
Clacu07g1056 218 SUPERFAMILY GST C-terminal domain-like 76 214 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0854 Clacu-Chr1:9678876 Clacu07g1056 Clacu-Chr7:25097989 4.60E-69 dispersed
Clacu07g1056 Clacu-Chr7:25097989 Clacu07g1058 Clacu-Chr7:25111282 8.50E-102 dispersed
Clacu07g1056 Clacu-Chr7:25097989 Clacu07g1057 Clacu-Chr7:25108832 2.00E-98 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1056 K00799 - csv:101218562 394.815