Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1058 ATGGGGGACGAAGTGAAGCTTTTAGATTTTTGGCCCAGCATGTTCGGTATGCGAGTCAGAGTAGCTCTGGCTCTAAAGGGCGTACCGAACGAATATGTGGATGAAGATCTAAGGAACAAGAGCTCTTTGCTTCTTCAAATGAACCCAATTCATAAGAAGATCCCTGTTCTTGTTCATAATGGAAAACCCATTTGTGAATCTTCCATAATCGTTCAGTATATTGATGAAGTTTGGAAGGATAAAGCTCCTCTGTTGCCATCTGATCCTTATGACAGAGCTCAGGCCAGATTTTGGGTAGATTTCATCGACAAGAAGCTTTTTGATGGTGGAAGGAAAATTTGGGCTACCAAAGGAGAGGAGCAAGAAGAAGGTAAGAAGGAGGTAATAGGAATATTGAAACAATTGGAAGAAGTTCTTGGGGAGAAGGGTTTGTTTGGAGGTGAATGTTTGGGATTTTTAGACATTGTTTTGATTGGATATTACACTTGGTTTTATGCCTACGAGACCATTGGAAACTTCAGCATTGAGGCTGAGTGTCCAAAGATAATGAGTTGGGTGAAGAGATGCTTACAAAATGAGAGTGTTGCTAAGTCTCTGCCTGACCCCAAGAAGGTTTGTGATTTTGTGCTTCAAATGAAGAAAAAGTATGGCCTTGACTAA 660 40.91 MGDEVKLLDFWPSMFGMRVRVALALKGVPNEYVDEDLRNKSSLLLQMNPIHKKIPVLVHNGKPICESSIIVQYIDEVWKDKAPLLPSDPYDRAQARFWVDFIDKKLFDGGRKIWATKGEEQEEGKKEVIGILKQLEEVLGEKGLFGGECLGFLDIVLIGYYTWFYAYETIGNFSIEAECPKIMSWVKRCLQNESVAKSLPDPKKVCDFVLQMKKKYGLD 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25111282 25112050 + ClG42_07g0105800.10 Clacu07g1058 253656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1058 219 Gene3D Glutaredoxin 1 87 - -
Clacu07g1058 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Clacu07g1058 219 Gene3D - 88 219 - -
Clacu07g1058 219 Pfam Glutathione S-transferase, C-terminal domain 116 191 IPR004046 -
Clacu07g1058 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Clacu07g1058 219 SFLD Glutathione Transferase (cytosolic) 2 217 IPR040079 -
Clacu07g1058 219 FunFam Tau class glutathione S-transferase 1 87 - -
Clacu07g1058 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Clacu07g1058 219 Pfam Glutathione S-transferase, N-terminal domain 5 76 IPR004045 -
Clacu07g1058 219 FunFam Glutathione S-transferase U20 88 219 - -
Clacu07g1058 219 SFLD Main.3: Omega- and Tau-like 2 217 IPR045073 -
Clacu07g1058 219 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Clacu07g1058 219 CDD GST_N_Tau 5 78 - -
Clacu07g1058 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Clacu07g1058 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 209 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2634 Clacu-Chr5:34007930 Clacu07g1058 Clacu-Chr7:25111282 6.50E-36 dispersed
Clacu06g1551 Clacu-Chr6:26428750 Clacu07g1058 Clacu-Chr7:25111282 1.50E-40 dispersed
Clacu07g1056 Clacu-Chr7:25097989 Clacu07g1058 Clacu-Chr7:25111282 8.50E-102 dispersed
Clacu07g1057 Clacu-Chr7:25108832 Clacu07g1058 Clacu-Chr7:25111282 6.10E-100 tandem
Clacu07g1058 Clacu-Chr7:25111282 Clacu07g1059 Clacu-Chr7:25115744 1.80E-59 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1058 K00799 - csv:101217848 407.142