Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1059 ATGAGAGTGAGGGTGGCTTTGGCAGAGAAAGGCATAAAATATGAAGGAAAAGAGGAAGATTTGAGCAACAAAAGCCCTTTGCTTTTGGAGATGAATCCTATTTACAAACAAATCCCAGTTTTGATTCACAAAGGGAAACCCATTATTGAGTCCTCTCTCATTGTTGAATATATTGATGAGGTTTGGAGTGACAATGGGGAAGCTTATACTAATTTGCTTCCTTCTCATCCTTTTGACAGAGCCCATGATAGGTTTTGGGTTGACTATGTGGACAAGAAGATTTATCCCATTGGAAGTAAGCTATGGAATAGAGAGAAGACAAAAGAGGAGAAAGAAGCAGCAGCAAAGGAATTGTTGGAGTGCTTTAAGCAGCTGGAAGAAGAGCTTGGAGAAAAAGACTATTTTGGTGGCCAAACATTTGGGATTATAGATATTGCTCTCATTCCATTTTACAGCATGTTTCTTGCATTCAAATTGCTTGGAAATTTGGATTTAGAAGTTGAATGTCCCAAGATCTTCCAATGGGTTAAGAGGTGCATTCAAAGAGAGAGTGTCTCAAACAATATGCCTGCCCAACCAGAGGTTTACGACATCGCTTTGGAATTCTTAGGACTTAAGCATCGAGATTACAGCGATCGTCTCAACGACTAA 651 39.63 MRVRVALAEKGIKYEGKEEDLSNKSPLLLEMNPIYKQIPVLIHKGKPIIESSLIVEYIDEVWSDNGEAYTNLLPSHPFDRAHDRFWVDYVDKKIYPIGSKLWNREKTKEEKEAAAKELLECFKQLEEELGEKDYFGGQTFGIIDIALIPFYSMFLAFKLLGNLDLEVECPKIFQWVKRCIQRESVSNNMPAQPEVYDIALEFLGLKHRDYSDRLND 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25115744 25116906 + ClG42_07g0105900.10 Clacu07g1059 253657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1059 216 SFLD Glutathione Transferase (cytosolic) 1 198 IPR040079 -
Clacu07g1059 216 SUPERFAMILY Thioredoxin-like 1 95 IPR036249 -
Clacu07g1059 216 CDD GST_C_Tau 77 202 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Clacu07g1059 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 76 202 IPR010987 -
Clacu07g1059 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 66 IPR004045 -
Clacu07g1059 216 Gene3D Glutaredoxin 1 75 - -
Clacu07g1059 216 Pfam Glutathione S-transferase, C-terminal domain 100 183 IPR004046 -
Clacu07g1059 216 Coils Coil 108 128 - -
Clacu07g1059 216 Pfam Glutathione S-transferase, N-terminal domain 1 60 IPR004045 -
Clacu07g1059 216 CDD GST_N_Tau 1 62 - -
Clacu07g1059 216 SFLD Main.3: Omega- and Tau-like 1 198 IPR045073 -
Clacu07g1059 216 SUPERFAMILY GST C-terminal domain-like 61 202 IPR036282 -
Clacu07g1059 216 Gene3D - 76 206 - -
Clacu07g1059 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 197 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1057 Clacu-Chr7:25108832 Clacu07g1059 Clacu-Chr7:25115744 6.90E-59 dispersed
Clacu07g1058 Clacu-Chr7:25111282 Clacu07g1059 Clacu-Chr7:25115744 1.80E-59 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1059 K00799 - mdm:103427999 261.536