Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu07g1099 | ATGAGTTCTTCAATGAAGGGAAACAATAGGATGTCCGCTGCCATGGAGAGAACGGGACAATGGATTTTCTCTCAAGACATTCCGACTGATGTCGTGGTTGCGGTCGGAGAAGCACATTTTCCTCTTCACAAGTTCATGTTGGTAGCAAAGAGCAACTACATAAGGAAATTGATAATGGAATCGACGGAGGCAGATCTAACAAGGATCGATCTGACGGACATTCCCGGCGGTGCTGAGATTTTCGAGAAGGCAGCGAAATTTTGCTACGGTGTGAACTTCGAGATCACGGTGCACAACGTGGCGGCGCTCCGATGTGCTGCAGAGTATCTGCAAATGACCGACAATTACTCCGACAACAACCTCGTCGGTCGGACCGAAGATTTCCTCTCTCAGGTGGCTCTCTCCAGCCTTTCTGGAGCCATAGTCGTTCTTAAATCTTCCCACCATCTTCTTCCCATGGCTGAAGACCTTTACATTGTCCATAGATGTGTGGATGTTATCAGTTCCAAGGCTTGCAACGAGGCGAACTTCCCAAGTCGATCACCTCCAAATTGGTGGACAGAGGAGCTAACCATAATCGACATCCAATTCTTCGCCAAAATCATAACTGCAATGAAATCTCGTGGCGCCAAAGCCTCAACTCTCTCCGCCGCTCTAATCACGTACGCCGAGAGATCTCTCCGCGATCTACTCCGCGACCACTCCGGCACCGCCCCCATCGACGATTCCGACACTAGCAGAACCAAACAACGAGAGCTCCTGGAATCAATAGTTTGTCTCTTACCTCCGGACAAAGCCGCATTCCCAATTAACTTCCTGTGCTGCCTACTCCGATCTGCGATTTACCTGAAAACAAGCATGGGGTGCAAGAACGAGGTGGAGAAGAGGATTTCGATGGTGCTGGAACATTTGAGCGTAGATGATTTGCTGGCAATGTCGTTCACGTACGACGGGGAGAGGCTGGTGGAGTTGGAAAGTATAAGGAGGATAATATTGGGATTTGTGGAAAGGGAGAAGAGCGTGGCGGTGTTTAATGCCGGAGATCTGAAAGAGGTTTGCTCTGTTTCGTTGCAAAGAGTGGGGAAGACGGTGGATGCGTATTTGGGGGAGATTGCTACTTATACCCAACTCACCATATCCAAATTTAATGGGATTGCTAATACAATACCCAAATTTGCACGCAAGGTTGATGATGATCTTTATAGAGCTATTGATATTTATCTCAAGGCACACCCAAATCTGGATGAGATCGAACGGGAGAAGGTATGCAGTGTGATGGAGCCGTTGAAGCTATCGTACGAAGCGCGAGTACATGCTTCGCAGAACAAGCGATTGCCGGTGCAAATAGTCCTTCACGCACTCTACTACGATCAGCTGAAGCTAAGAAGCGGCACGGCGGAGGAGCGGAGCGCCCACGACGCGGCCATGACAAGGAATCAAGCACAGGCAGATGTGTCATTAGTGAAAGAGAATGAGGCATTGAGGTGTGAGTTAATGAAGATGAAGCTTTACATATCTGACATGCACAAGAATTCTCAAGGAACATCTTCCATGAAAGCACCACCTTCTAGAACCAAGCCCACCTTCTTCTCCACAGTCACTAAAACACTTGGCAAATTAAATCCCTTCCGTCATGGTTCTAAAGACACTTCTAACATCGTTGACGCTGTCGACATTACGAAGCCCAGGAGGAGAAGGGTCACTGCTGAGTTTGTTTATTCAAGATTGGTGTGTCTATTGGGAATGGCAATGGCGGCCACTTCCCTTTCGAACCTGCCTTCTGCTCTCTTCCATGGAAATCTGCAGAGAAATGAATTTGGGTCTGTGGGTATGCGGAGACAACCCAACAAGTATCTCAAATCCAATCTTAGAGCTCCGGTTGTGAGATGCCAATCAACTGAAGTCGATGGACCGAAAACAAAAAGAAATCTGCTCGACAATGCCAGCAATCTTCTTACCAATTTGTTAAGTGGTGGAAATTTGGGATCTATGCCGATAGCTGAAGGTGCAGTCTCTGATTTGTTCGGCCGCCCACTCTTCTTTGCACTGTATGATTGGTTCTTAGAGCATGGATCTGTTTATAAACTTGCCTTTGGACCAAAAGCCTTTGTTGTTGTATCAGATCCTATTGTGGCAAGATATATTCTTCGTGAAAACGCATTTGGTTATGACAAGGGAGTGCTTGCTGATATTCTAGAACCGATAATGGGTAAAGGACTAATACCAGCTGATCTTGACACTTGGAAGCAGAGGAGACGAGTTATAGCTCCTGGATTCCATGCCTTATACTTGGAAGCTATGACCAAAGTCTTCACTGATTGTTCAGAACGATCAATACTGAAATTAGAAAAGCTTCTAGGAGAAGGTGAACTTCAGGAGGATAAAACCGTTGAGTTGGATATGGAAGCAGAGTTTTCGAGTTTGGCTCTTGATATCATTGGACTTGGTGTTTTCAACTATGATTTTGGTTCTGTAACCAAAGAATCCCCAGTGATTAAGGCTGTATATGGAACCCTTTTTGAAGCAGAGCATAGATCAACTTTCTATATCCCATACTGGAAAGTACCTTTGGCAAGGTGGATAGTCCCAAGGCAGCGTAAATTCCATAGTGACCTTAAGGTTATTAATGACTGTCTTGATGGACTAATACGAAATGCAAGAGAAACCCGAGAGGAAGCCGATGTTGAGAAATTGCAGCAAAGGGACTATTTAAATCTCAAGGATGCCAGTCTTTTGCGTTTCTTAGTTGATATGCGGGGAGTTGATGTCGATGATCGGCAGCTTCGGGACGATCTGATGACAATGCTTATTGCCGGGCATGAAACAACTGCTGCTGTGCTTACATGGGCTGTTTTTTTGCTTGCACAAAACCCTTCAAAAATGAAAAAAGCTCAGGCAGAGATCGATTTGGTTCTTGGCAAGGGAAGGCCAACTTTTGAATTACTTAAAGGATTGAAGTACATCAGACTTATCGTCGCAGAGACTCTTCGTTTGTTTCCTCAGCCACCATTGCTAATAAGACGAGCTCTCAAACCGGATACATTGCCAGGAGGATACAATGGTGACAAAAATGGATATGCAATACCTGCAGGAACTGACATCTTCATCTCTGTTTACAATCTCCACAGATCTCCATACTTCTGGGAAAACCCTCAAGAATTTGAACCAGAGAGATTTCAAGTAAAGAAGGCAAGCGAGGGAATTGAAGGATGGGATGGTTTTGACCCATCAAGAAGCCCTGGAGCTCTATACCCAAACGAGATTGTATCAGACTTTTCCTTCTTACCATTTGGTGGAGGACCTAGAAAATGTGTGGGGGATCAATTTGCTCTAATGGAGTCAACTATAGCACTGGCCATGTTACTGCAGAAGTTTGATGTGGAACTAAGAGGAAGCCCAGAATCTGTGGAACTTGTTACTGGGGCCACTATACATACCAAAGGTGGCTTGTGGTGCAAACTGAAAAGAAGATCACAAGACCAACTACAAGATTCTCAGAATCGCTTGCAAAATTTCATGGTAGTAAGAGAGCCTCAAGAAGAAATATACTTGTTAAAAGGACTCGTGGCAGACCTGGGATTATTACACCAACTTGTCTGA | 3600 | 45.36 | MSSSMKGNNRMSAAMERTGQWIFSQDIPTDVVVAVGEAHFPLHKFMLVAKSNYIRKLIMESTEADLTRIDLTDIPGGAEIFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDNYSDNNLVGRTEDFLSQVALSSLSGAIVVLKSSHHLLPMAEDLYIVHRCVDVISSKACNEANFPSRSPPNWWTEELTIIDIQFFAKIITAMKSRGAKASTLSAALITYAERSLRDLLRDHSGTAPIDDSDTSRTKQRELLESIVCLLPPDKAAFPINFLCCLLRSAIYLKTSMGCKNEVEKRISMVLEHLSVDDLLAMSFTYDGERLVELESIRRIILGFVEREKSVAVFNAGDLKEVCSVSLQRVGKTVDAYLGEIATYTQLTISKFNGIANTIPKFARKVDDDLYRAIDIYLKAHPNLDEIEREKVCSVMEPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGTAEERSAHDAAMTRNQAQADVSLVKENEALRCELMKMKLYISDMHKNSQGTSSMKAPPSRTKPTFFSTVTKTLGKLNPFRHGSKDTSNIVDAVDITKPRRRRVTAEFVYSRLVCLLGMAMAATSLSNLPSALFHGNLQRNEFGSVGMRRQPNKYLKSNLRAPVVRCQSTEVDGPKTKRNLLDNASNLLTNLLSGGNLGSMPIAEGAVSDLFGRPLFFALYDWFLEHGSVYKLAFGPKAFVVVSDPIVARYILRENAFGYDKGVLADILEPIMGKGLIPADLDTWKQRRRVIAPGFHALYLEAMTKVFTDCSERSILKLEKLLGEGELQEDKTVELDMEAEFSSLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKVPLARWIVPRQRKFHSDLKVINDCLDGLIRNARETREEADVEKLQQRDYLNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDLVLGKGRPTFELLKGLKYIRLIVAETLRLFPQPPLLIRRALKPDTLPGGYNGDKNGYAIPAGTDIFISVYNLHRSPYFWENPQEFEPERFQVKKASEGIEGWDGFDPSRSPGALYPNEIVSDFSFLPFGGGPRKCVGDQFALMESTIALAMLLQKFDVELRGSPESVELVTGATIHTKGGLWCKLKRRSQDQLQDSQNRLQNFMVVREPQEEIYLLKGLVADLGLLHQLV | 1199 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 25527443 | 25540537 | - | ClG42_07g0109900.10 | Clacu07g1099 | 253697 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu07g1099 | 1199 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 1097 | 1106 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu07g1099 | 1199 | Pfam | NPH3 family | 184 | 435 | IPR027356 | - | |
| Clacu07g1099 | 1199 | Gene3D | Cytochrome P450 | 663 | 1175 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | SUPERFAMILY | POZ domain | 12 | 128 | IPR011333 | - | |
| Clacu07g1099 | 1199 | ProSiteProfiles | NPH3 domain profile. | 184 | 460 | IPR027356 | - | |
| Clacu07g1099 | 1199 | FunFam | BTB/POZ domain-containing protein At1g03010 | 5 | 125 | - | - | |
| Clacu07g1099 | 1199 | SUPERFAMILY | Cytochrome P450 | 675 | 1157 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | P450 superfamily signature | 1095 | 1104 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | P450 superfamily signature | 990 | 1001 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | P450 superfamily signature | 938 | 955 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | P450 superfamily signature | 1104 | 1115 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | SMART | BTB_4 | 29 | 133 | IPR000210 | GO:0005515(InterPro) | |
| Clacu07g1099 | 1199 | ProSiteProfiles | BTB domain profile. | 29 | 97 | IPR000210 | GO:0005515(InterPro) | |
| Clacu07g1099 | 1199 | Pfam | Cytochrome P450 | 687 | 1147 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | CDD | CYP97 | 681 | 1151 | - | - | |
| Clacu07g1099 | 1199 | PANTHER | OS12G0117600 PROTEIN | 26 | 521 | IPR043454 | - | |
| Clacu07g1099 | 1199 | Gene3D | Potassium Channel Kv1.1; Chain A | 5 | 133 | IPR011333 | - | |
| Clacu07g1099 | 1199 | Pfam | BTB/POZ domain | 24 | 114 | IPR000210 | GO:0005515(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | E-class P450 group I signature | 947 | 973 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | E-class P450 group I signature | 1104 | 1127 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | E-class P450 group I signature | 687 | 706 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | E-class P450 group I signature | 927 | 944 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1099 | 1199 | PRINTS | E-class P450 group I signature | 1094 | 1104 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu04g1007 | Clacu-Chr4:24295185 | Clacu07g1099 | Clacu-Chr7:25527443 | 8.30E-108 | dispersed | |
| Clacu07g0184 | Clacu-Chr7:2285094 | Clacu07g1099 | Clacu-Chr7:25527443 | 2.80E-102 | dispersed | |
| Clacu07g1099 | Clacu-Chr7:25527443 | Clacu10g0803 | Clacu-Chr10:13432172 | 7.70E-120 | dispersed | |
| Clacu07g1099 | Clacu-Chr7:25527443 | Clacu02g1275 | Clacu-Chr2:25489254 | 2.00E-123 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu07g1099 | K24543 | - | csv:101210292 | 1062.75 |