Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1119 ATGCTGCTGGGTTCTTCTTGTTTCCAGAAGAAGATGGCCAGTGAAAACTTTGGGTTATGGCTATTTTTTATTGCTTCTCTACAGTTTTTCCTTCAAGCACAGTGTATTAATGTGGGGATTACTTATGTTCAAGATGCTGGTATCAAAGGAGCTGTTTGTTTGGATGGAAGTCCTCCAGCTTATCACTTCAGCGACGGATTTGGCTCGGGAGTCGATAATTGGTTGATACAACTCGAGGGAGGAGGATGGTGCAACAATGTCACAAGTTGCCTCCAACGCAGGGACACTCGTTTAGGATCGTCTAAGAAAATGGTTACCGAGCTTGCGTTCTCAGGAATTTTGAGCAATAAACAGAAATTCAATCCAGATTTCTATAACTGGAACAGAATCAAGGTTCGGTACTGTGATGGATCTTCTTTTACCGGAGACGTTGAAGCCGTTGATCCCGCTACCAATCTGCATTTCAGAGGAGCAAGAGTTTTTCGTGCTATCATCAATAACCTACTTGCCAAGGGAATGAAGAATGCAAAAAACGCTATTCTCTCGGGTTGTTCGGCGGGTGGATTGAGTTCCATTTTACATTGTGATAACTTCAAATCTCTACTTCCTCCTACTACTAAAGTGAAGTGCCTCTCAGATGCAGGATACTTTATCAACGCGAAAGATGTCTCTGGAGCGCAGCACATTGAAGACTTCTACAGCGACGTAGTTGCTACCCATGGTTCTGCAAAGAATTTGCCTATATCATGCACATCAAAAATGAAACCTGAGATGTGTTTCTTTCCTCAAAATGTGGTTCAGCTCATTCAGACTCCAATATTTCTTGTAAATGCAGCCTATGATTCATGGCAGATAAAGAATATACTGGCACCTGGTGTTGCTGATCCACACGGTACTTGGCATGACTGCAAGCTTGACATCAAAAACTGCTCGCCCATTCAGATTCGAATCATGCAAGATTTCAGGGTTCAGTTTTTGAGTGCATTGAATGGCGTTGGAAGTTCTTTATCAAGAGGGCTGTTCATAGATTCTTGCTATGCCCATTGCCAAACTGAAATGCAGGAGACATGGTTACGAGCGGATTCTCCCATGCTGAGTAAGACGGACTTGCGACATCTTTGCAAGAGCACGCTGGTTCATTTGTTTCCATGGAAGCTTAGACGCCCAGTAGGTTTTGCTAGAATGGATTGGGCATTCGTCCACAAAGCTTGGGACAGATGGGCTTCCGCCAGCATTGGCACCTTCGGCCAGCCATTGAAAGCTGCTCTGTTGATTAATTATGATCCAACTGGACCTTCCCGCTTGCTTTCAACCATTGCAGAACAAGAAGGAATATTGCTTAATCCCATAGAGCTGAATCAGTTTGTCGATTTCATCAAACGGGACAAACCCCAAAATGAGAGTTTCAGCATTGGCTCAAATCAATACATAATGACATCAGTCCATGAGAATTGGTTTTGTGCAAGGTGCATGAACACTATAAAGCATGCTGGTGAGGGTGTTGTTATAGTGCAAACAACAGCATTTATGTTGGTTGCTATGTATGATGGTTCAATTGCAGCAGCATCTCGCGCTATGGCAGCTGCGGATCAGTTATCTTGGCAATTAGGCAGGAAAAATCTTTAG 1626 43.54 MLLGSSCFQKKMASENFGLWLFFIASLQFFLQAQCINVGITYVQDAGIKGAVCLDGSPPAYHFSDGFGSGVDNWLIQLEGGGWCNNVTSCLQRRDTRLGSSKKMVTELAFSGILSNKQKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPATNLHFRGARVFRAIINNLLAKGMKNAKNAILSGCSAGGLSSILHCDNFKSLLPPTTKVKCLSDAGYFINAKDVSGAQHIEDFYSDVVATHGSAKNLPISCTSKMKPEMCFFPQNVVQLIQTPIFLVNAAYDSWQIKNILAPGVADPHGTWHDCKLDIKNCSPIQIRIMQDFRVQFLSALNGVGSSLSRGLFIDSCYAHCQTEMQETWLRADSPMLSKTDLRHLCKSTLVHLFPWKLRRPVGFARMDWAFVHKAWDRWASASIGTFGQPLKAALLINYDPTGPSRLLSTIAEQEGILLNPIELNQFVDFIKRDKPQNESFSIGSNQYIMTSVHENWFCARCMNTIKHAGEGVVIVQTTAFMLVAMYDGSIAAASRAMAAADQLSWQLGRKNL 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25832739 25840152 - ClG42_07g0111900.10 Clacu07g1119 253717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1119 541 Pfam Profilin 437 536 IPR048278 GO:0003779(InterPro)
Clacu07g1119 541 SUPERFAMILY Profilin (actin-binding protein) 404 532 IPR036140 -
Clacu07g1119 541 Pfam Pectinacetylesterase 32 372 IPR004963 GO:0016787(InterPro)
Clacu07g1119 541 PANTHER NOTUM-RELATED 35 373 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Clacu07g1119 541 Gene3D Dynein light chain 2a, cytoplasmic 403 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g0962 Clacu-Chr5:8482553 Clacu07g1119 Clacu-Chr7:25832739 4.80E-95 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1119 K19882 - vvi:100245856 781.556