Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1125 ATGGCCGGCGGCCAGTCCCGTAAGTGGCTGGTTCTAGTAGCGACCATATGGATTCAGGCATTCACAGGCACGAACTTCGATTTCTCGGCTTACTCTTCCAGATTGAAATCGGTTTTAGCCATTTCTCAGGTTCAGCTTAATTACCTCGCCACCGCCTCCGATCTCGGCAAAGTCTTCGGCTGGTCCTCTGGCTTGGCTCTGCTTCACCTGCCTTTGCCGCTCGTTCTCTTCATCGCCGCTTTTTTGGGACTCATCGGCTACGGCTTCCAATGGCTTCTAATCGCTGATTTCATCTCCTTCCCCTATTTCCTGGTGTTCTTCTTGTGTTTGCTTGCCGGTTGTAGCATTTGTTGGTTCAACACAGTTTGTTTCGTCCTTTGCATTCGAAATTTCTCTGCAAATCGGCCATTGGCGTTATCTCTCACTGTCAGCTTCAATGGCGTCAGTGCAGCTTTCTACACCCTCGCCGGCAACGCCATTAATCCCTCTTCCCCTCCCATTTACCTCCTCCTCAATGCTCTCGTTCCCCTTCTCACCTCCATCGCCGCCTTCCTCCCCGTCCTCCACCAACCGCCACTTCACTCTCTTTCTCTCTCCTCCCACGCCGTCCACCGAGACTCTCTCATTTTTCTCATCTTGAATTTCCTCGCCGTCGCCGTTGGAATCTACCTTCTCCTCTTTGGCTCTGTCACTTCCGCTGATCCCATGATCGCAAGACTCCTCTTCATCGGAGCCATCGTTCTTCTTATCTTGCCTCTCTGTATTCCCGGTGTTGTTTACGCCAATGATTGGTTCCATCGAACCGTTAATTCCAGCTTCAGTCTCGACGGATCTAATTTCATTCTCGTCCACGACGAAGATCTCGAGTTTCACAAAGAGTTGCTCCTCACTCGCGAAACGAGTGGAAGCTTAGGCAATGGCGCATCTCGGTTGTTGTCCGAATCTACTTTGCTAATTGACGGTGAGATTGAATCATCGAAAGGCTGTTTTCGGAAATTGATTGAGATAGATCAATTAGCGATGCTTGGGGAAGAGCATTCGTCGAGTAGATTGGTGAAACGCCTGGATTTTTGGCTGTATTTTATGGCTTACATTTGTGGAGGCACAATCGGTCTCGTTTACAGCAATAACATTGGTCAGATTGCACAGTCGCTAGGGCTGAGTTCAAAAACCACAGCGATTGTAACACTGTACTCCTCCTTCTCCTTCTTCGGCCGATTGCTCTCCGCCGTACCGGACTACATTCGAGCGAAATTGTATTTCGCAAGAACAGGATGGCTTTCAATTGCCCTAATTCCAACTCCCATAGCATTCTTCCTGCTATCGGCGTCATCGAGTGCGTTGGCAGTGTACATAGGCACGGCGTTGATCGGTTTGAGCTCGGGATTCATATTCGCAGCGGCAGTTTCGATTACCGCGGAGCTGTTCGGGCCAAATAGCTTAGGCGTTAACCACAACATTTTGATCACAAACATTCCGATCGGATCTCTGCTGTACGGGATGTTTGCAGCGGTGGTGTACGATTCGCAGGGAAGAAGCTCCGGCGATGGGGAGGCAGTTGTGTGCATGGGAAGAAGGTGCTATTTCTTAACATTTGTATTCTGTGGATGCATTTCTGTTATGGGATTGGTTTCGAGTGTGTTACTGTTCTTGAGAACAAGACATGCATATGACCACTTTGAAAGTAGTAGGATTTCTAGTAGTTCAAATCGATTGTATTGA 1722 48.9 MAGGQSRKWLVLVATIWIQAFTGTNFDFSAYSSRLKSVLAISQVQLNYLATASDLGKVFGWSSGLALLHLPLPLVLFIAAFLGLIGYGFQWLLIADFISFPYFLVFFLCLLAGCSICWFNTVCFVLCIRNFSANRPLALSLTVSFNGVSAAFYTLAGNAINPSSPPIYLLLNALVPLLTSIAAFLPVLHQPPLHSLSLSSHAVHRDSLIFLILNFLAVAVGIYLLLFGSVTSADPMIARLLFIGAIVLLILPLCIPGVVYANDWFHRTVNSSFSLDGSNFILVHDEDLEFHKELLLTRETSGSLGNGASRLLSESTLLIDGEIESSKGCFRKLIEIDQLAMLGEEHSSSRLVKRLDFWLYFMAYICGGTIGLVYSNNIGQIAQSLGLSSKTTAIVTLYSSFSFFGRLLSAVPDYIRAKLYFARTGWLSIALIPTPIAFFLLSASSSALAVYIGTALIGLSSGFIFAAAVSITAELFGPNSLGVNHNILITNIPIGSLLYGMFAAVVYDSQGRSSGDGEAVVCMGRRCYFLTFVFCGCISVMGLVSSVLLFLRTRHAYDHFESSRISSSSNRLY 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 25898937 25906164 + ClG42_07g0112500.10 Clacu07g1125 253723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1125 573 SUPERFAMILY MFS general substrate transporter 344 555 IPR036259 -
Clacu07g1125 573 Gene3D MFS general substrate transporter like domains 350 561 IPR036259 -
Clacu07g1125 573 Pfam Nodulin-like 8 256 IPR010658 -
Clacu07g1125 573 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 559 - GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g0063 Clacu-Chr6:795472 Clacu07g1125 Clacu-Chr7:25898937 3.90E-173 dispersed
Clacu07g1125 Clacu-Chr7:25898937 Clacu02g1212 Clacu-Chr2:24605836 3.50E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1125 - - - 0.0