Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1207 ATGGCCGAGGAGAAGATAGGGGAAGAAGGCAACAAAAATTTGAGGGGAAGAAAGTCTACATGGCCAACCCTCCGCCGTGTAGACTCACTCAATTTGGAGGCCGGTCAGATTCCGGCCATCGCATCTCGTCAACTCTCCAGCGTAAATTGGCGGCGAACATTAAGCTTGGCGTTTCAGAGCGTGGGAGTGGTGTACGGCGACATCGGGACATCGCCGTTGTACGTGTTTGCAAGCACATTCAGCAACGGGGCGATCGGGGACACAGACGATGTGATCGGAGTTCTATCACTCATAATCTATACCATAGCATTGGTTCCATTGTTGAAGTATGTTTTCATTGTGCTGTGGGCAAATGATAATGGCGATGGGGGGACATTTGCCCTTTACTCGTTGTTGTGCCGCTACGTGAAAGTGGGGTTGATTCCTAATGAACAGCCAGAGGACATGGAACTCTCAAATTATCAGCTCCTTATGCCTTCCAATTTGAGAAGATCTCAGAAAGTGAAAGAGAAGCTGGAGAATAGTATGTTTGCAAAAGTTGCCCTTTTTCTTGTCACTATTGCTGGGACTTCCATGGTTATTGGAGATGGAGTTCTCACTCCATCTATCTCGGTTCTCTCAGCAGTGAGTGGAATCAAATCACTAGGAACAGATGCGGTTGTGGGGGTTTCAGTAGCTATTCTTGTAATTTTGTTCTGCATTCAACGATTTGGAACTGACAAAGTTGGATTCTCATTTGCCCCAATAATATTTATTTGGTTTGCATTTATTGGTGGCATTGGCCTCTTCAACTTGTTCAAGCATGACCCTGCTGTTCTCAAAGCTTTTAACCCTAAATATATCTTTGATTACTTCAAAAGAAATGGCAAACAAGCTTGGGTTTCCCTTGGTGGAGTTTTTCTTTGCATCACAGGGACTGAGGCCATGTTTGCTGATTTGGGTCACTTCAATGTTAGAGCCATCCAGATTAGTTTCTCTTCTATTGTATTCCCTGCTTTATTAGCAGCCTACAGTGGGCAAGCTGCATATCTAAGAAAATTCCCAGATCATGTTGGCAATACTTTCTATGACTCAATTCCAGATCCTTTGTACTGGCCAATGTTCGTAGTTGCAGTGGCAGCCTCCATCATAGCAAGCCAAGCAATGATCTCAGGAGCATTTGCCATAATATCACAATCCTTGTCTTTAGGTTGCTTCCCAAGAGTAAAAGTTATCCACACTTCACCCAAATACGAAGGCCAAGTTTACATCCCAGAGATCAATTACCTTCTAATGTTGGCGTGTGTGATCGTAACCGCGGCCTTCAGAACCACGGAGAACATCGGTCACGCCTACGGCATTGCGGTCGTGTCCGTCATGATCATGACCACCGCCATGGTTTCTCTCATCATGGTGGTTATTTGGAAGACCAGTATTTGGTTGATAGTTTGTTTCATTCTGGTGTTTGGCTCTATTGAACTTCTCTATTTCTCGTCTGTTCTTTACAAGTTCACTCAAGGCGGGTTTCTTCCTCTTATTCTTGCTCTTTTTCTCATGGCTGTCATGATTGTTTGGCACTATGTTCATAGGGAAAGATACATTTTTGAACTCAAAAATAAGGTCTCTAGTGGCTACATAACCGAGCTAGCTAATAATCCTGATGTTAACCGAATTCCTGGAATTGGTCTTCTTTACTCTGAGTTGGTTCAAGGTATTCCTCCCATTTTTCCTCACTTCATTTCTAGTATTCCTTCTGTTCACTCAGTCATCGTCTTCGTCTCCATCAAGTCCATTCCCATCAGCAAAGTCACACCCGACGAGCGGTTTTTGTTCCGCCATGTCGAGCCCAGGGAGTACCATATGTTTCGATGTGTCGTCAGATATGGATACAAAGACATAGTCACCGGATCTGCTGAGTTTGAGCGGCAGTTGGTGGAGAGCTTGAAAGAATTCATACGCCAAGAACATGTAATGCGGGAAGGTGTTCCAGTAGAGCCACCAGCTTCAGCCAAAATTGAACCAACAAAAGTAAAACCTTCTTCTTCTTCTTCTTCAGTAGCAACAGTGCATGTGGAAGGTGCGATGACAGTATCCGCGGAAATGGGAAACCAGTCATCTCGACGCTCGTCAGGGTCCATTCAGCCGGTTGGCGGTTCGAAATCGAGGGGGTCGGATCGTCAAGTACTAGGAGTGGCTGCAGTGGAAGAAGAGATGGGATTTATAGAGAAAGCAATGAAGAAAGGGGTGGTTTATTTGTTGGGAGAAGCAGAGGTAGTGGCTGAACCAAAATCCTCATTGTTTAAGAAGATGGTGGTTAATTATGCTTATAGTTTCTTGAGGAAGAACTTTAGGCAAGGGGAAAATATTCTTGAGATTCCACGTACAAGGCTTTTAAGGGTTGGAATGACTTATGAAATATGA 2400 44.42 MAEEKIGEEGNKNLRGRKSTWPTLRRVDSLNLEAGQIPAIASRQLSSVNWRRTLSLAFQSVGVVYGDIGTSPLYVFASTFSNGAIGDTDDVIGVLSLIIYTIALVPLLKYVFIVLWANDNGDGGTFALYSLLCRYVKVGLIPNEQPEDMELSNYQLLMPSNLRRSQKVKEKLENSMFAKVALFLVTIAGTSMVIGDGVLTPSISVLSAVSGIKSLGTDAVVGVSVAILVILFCIQRFGTDKVGFSFAPIIFIWFAFIGGIGLFNLFKHDPAVLKAFNPKYIFDYFKRNGKQAWVSLGGVFLCITGTEAMFADLGHFNVRAIQISFSSIVFPALLAAYSGQAAYLRKFPDHVGNTFYDSIPDPLYWPMFVVAVAASIIASQAMISGAFAIISQSLSLGCFPRVKVIHTSPKYEGQVYIPEINYLLMLACVIVTAAFRTTENIGHAYGIAVVSVMIMTTAMVSLIMVVIWKTSIWLIVCFILVFGSIELLYFSSVLYKFTQGGFLPLILALFLMAVMIVWHYVHRERYIFELKNKVSSGYITELANNPDVNRIPGIGLLYSELVQGIPPIFPHFISSIPSVHSVIVFVSIKSIPISKVTPDERFLFRHVEPREYHMFRCVVRYGYKDIVTGSAEFERQLVESLKEFIRQEHVMREGVPVEPPASAKIEPTKVKPSSSSSSVATVHVEGAMTVSAEMGNQSSRRSSGSIQPVGGSKSRGSDRQVLGVAAVEEEMGFIEKAMKKGVVYLLGEAEVVAEPKSSLFKKMVVNYAYSFLRKNFRQGENILEIPRTRLLRVGMTYEI 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 26945961 26955445 + ClG42_07g0120700.10 Clacu07g1207 253805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1207 799 MobiDBLite consensus disorder prediction 692 714 - -
Clacu07g1207 799 MobiDBLite consensus disorder prediction 659 678 - -
Clacu07g1207 799 NCBIfam potassium uptake protein 56 799 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Clacu07g1207 799 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 39 799 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Clacu07g1207 799 MobiDBLite consensus disorder prediction 692 717 - -
Clacu07g1207 799 Pfam K+ potassium transporter integral membrane domain 56 536 IPR053951 -
Clacu07g1207 799 Pfam K+ potassium transporter C-terminal domain 552 799 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1207 Clacu-Chr7:26945961 Clacu09g0606 Clacu-Chr9:5179953 2.90E-224 dispersed
Clacu07g1207 Clacu-Chr7:26945961 Clacu10g1060 Clacu-Chr10:22538122 5.30E-226 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1207 K03549 - csv:101205628 1330.08