Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu07g1236 | ATGCCGAAGCTGGTTTTGAAAGGGGGGAGTAGGCCTCCATGGGTTGGCTTAGCTGCTGCTGTTTGGGTTCAAATAGCTGGTGGTTCTTCTTATAACTTTTCTCTTTATTCACACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACTGTGTTGGGAGTGGCTAATGACATTGGAGAGAGTATGGGTTTGGTTCCTGGCCTTGCCTGTAACAGATTTCCTCCATGGGTTATACTTTTGTTTGGTGCTTTCTGTTGCTTTCTGGGTTATGGGGCTATTTGGCTTGCTGTTAGCAGGACTGTCCCCAATCTGCCTTATTGGCTGCTATGGATTACACATTGTATTGCTACAAATAGCAATGCATGGTTTGGAACAGCTGTGCTCGTAACCAACATGAGGAATTTCCCTCTTAGCAGAGGTACTGTTGCTGGCATTCTTAAAGGTTATGTCGGGCTTAGTGCTGCTGTATACACAGTGATATACAGTATGGTGCTGAAAAAGTCTGCTTTGAATTTACTGTTGTTTCTTGCGATCGGGATACCCATTTTGTGCTTAGCCTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCATCAGAGGATCCATCTGAGCGTGCTCATTTTCTTTTCACACAAGCTGCTTGTGTTTTGCTAGCTGTTTTTTTAGTCTCGACCACAATTCTAGATGCAACAACAACCCCTAGTGACGCCGTTGGATACACCTTAGTTGCCATAATGGTTATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTGCAAAATCCAAAAAACTTGGCCCTCGAGTTGATTCTGCGGAACCTTTGGCTTCTGGAGAAAGCGATTCTTCCCAAATTGAACCTCTATTGACACCATCTTCCTCAGCTACAAATCTTGGAAGTTTCTGCGAGAATGATGATTCATCAGATGTAGAAACACTTCTTGCTGTGGGAGAGGGAGCGATTCATAAGAAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAAGCTCCGTGAAGCCGTAATCAAAGCTGATTTCTGGCTGCTTTGGTTCTTGTACTTCCTCGGGGTCGGTCCAGGAATAACAATTCTCAACAATTTGTCTCAAATTGGGATTTCATTAGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTTTGCAATTTTGTCGGTCGTCTAGGCTCTGGTGTTATTTCCGAACACTTTGTCAGGTCAAGAATGATACCTCGCTCACTGTGGATGATGTTTGCACTAATACTCATGGCTATAGCATTCCTCCTGTATGCATCTGCTCTCACGGGTACTCTCTACGTCGCCACTGGTTTAACTGGAATCAGCTACGGAGTTCTGTACTCTATGATGGTCCCTCTCGCATCTGAGATTTTTGGTCTAAAGAATTTTGGAGTAATCTTCAACTTCATGCAGCTGGGGAATCCAATAGGAGCAGTCCTTTTCTCAGTTCTACTCGCCAGTACTCTATACGACAACGAAGCTGCTAAGCAAGGTTCGATAACCTGCATAGGCCAACAGTGCTTCAGGACGACTTTCTTCATCCTTTCGGGCGTTGCTGGGTTAGGTTCGATCGTGAGCATGATTCTGACTGTTAGATTAAGGCCAGTCTATCAAATGCTATACTCCGGTGGCTCGTTCCGCTTGCCTCAAAGTTCAGGTCATTGA | 1698 | 44.35 | MPKLVLKGGSRPPWVGLAAAVWVQIAGGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESMGLVPGLACNRFPPWVILLFGAFCCFLGYGAIWLAVSRTVPNLPYWLLWITHCIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMVLKKSALNLLLFLAIGIPILCLALMYFVRPCTPASSEDPSERAHFLFTQAACVLLAVFLVSTTILDATTTPSDAVGYTLVAIMVILLMSPLAVPIKMTICAKSKKLGPRVDSAEPLASGESDSSQIEPLLTPSSSATNLGSFCENDDSSDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITILNNLSQIGISLGVNDTTLLLALFSFCNFVGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASALTGTLYVATGLTGISYGVLYSMMVPLASEIFGLKNFGVIFNFMQLGNPIGAVLFSVLLASTLYDNEAAKQGSITCIGQQCFRTTFFILSGVAGLGSIVSMILTVRLRPVYQMLYSGGSFRLPQSSGH | 565 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 27224077 | 27227776 | - | ClG42_07g0123600.10 | Clacu07g1236 | 253834 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu07g1236 | 565 | MobiDBLite | consensus disorder prediction | 282 | 298 | - | - | |
Clacu07g1236 | 565 | SUPERFAMILY | MFS general substrate transporter | 13 | 199 | IPR036259 | - | |
Clacu07g1236 | 565 | Gene3D | MFS general substrate transporter like domains | 7 | 275 | IPR036259 | - | |
Clacu07g1236 | 565 | Gene3D | MFS general substrate transporter like domains | 346 | 548 | IPR036259 | - | |
Clacu07g1236 | 565 | MobiDBLite | consensus disorder prediction | 274 | 298 | - | - | |
Clacu07g1236 | 565 | Pfam | Major Facilitator Superfamily | 355 | 545 | IPR011701 | GO:0022857(InterPro)|GO:0055085(InterPro) | |
Clacu07g1236 | 565 | PANTHER | UNCHARACTERIZED NODULIN-LIKE PROTEIN | 13 | 548 | - | GO:0016020(PANTHER) | |
Clacu07g1236 | 565 | CDD | MFS_Mch1p_like | 12 | 533 | - | - | |
Clacu07g1236 | 565 | Pfam | Nodulin-like | 13 | 260 | IPR010658 | - | |
Clacu07g1236 | 565 | SUPERFAMILY | MFS general substrate transporter | 332 | 546 | IPR036259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g0446 | Clacu-Chr2:4040062 | Clacu07g1236 | Clacu-Chr7:27224077 | 2.90E-83 | dispersed | |
Clacu07g1236 | Clacu-Chr7:27224077 | Clacu11g0925 | Clacu-Chr11:8935009 | 2.40E-92 | dispersed | |
Clacu07g1236 | Clacu-Chr7:27224077 | Clacu02g1212 | Clacu-Chr2:24605836 | 1.10E-92 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu07g1236 | - | - | - | 0.0 |