Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1236 ATGCCGAAGCTGGTTTTGAAAGGGGGGAGTAGGCCTCCATGGGTTGGCTTAGCTGCTGCTGTTTGGGTTCAAATAGCTGGTGGTTCTTCTTATAACTTTTCTCTTTATTCACACTTGCTTAAATCTGTTCTGGGTTTGAATCAGCAGCAGCTTACTGTGTTGGGAGTGGCTAATGACATTGGAGAGAGTATGGGTTTGGTTCCTGGCCTTGCCTGTAACAGATTTCCTCCATGGGTTATACTTTTGTTTGGTGCTTTCTGTTGCTTTCTGGGTTATGGGGCTATTTGGCTTGCTGTTAGCAGGACTGTCCCCAATCTGCCTTATTGGCTGCTATGGATTACACATTGTATTGCTACAAATAGCAATGCATGGTTTGGAACAGCTGTGCTCGTAACCAACATGAGGAATTTCCCTCTTAGCAGAGGTACTGTTGCTGGCATTCTTAAAGGTTATGTCGGGCTTAGTGCTGCTGTATACACAGTGATATACAGTATGGTGCTGAAAAAGTCTGCTTTGAATTTACTGTTGTTTCTTGCGATCGGGATACCCATTTTGTGCTTAGCCTTGATGTACTTTGTTCGACCTTGTACTCCGGCTTCATCAGAGGATCCATCTGAGCGTGCTCATTTTCTTTTCACACAAGCTGCTTGTGTTTTGCTAGCTGTTTTTTTAGTCTCGACCACAATTCTAGATGCAACAACAACCCCTAGTGACGCCGTTGGATACACCTTAGTTGCCATAATGGTTATCCTTTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTGTGCAAAATCCAAAAAACTTGGCCCTCGAGTTGATTCTGCGGAACCTTTGGCTTCTGGAGAAAGCGATTCTTCCCAAATTGAACCTCTATTGACACCATCTTCCTCAGCTACAAATCTTGGAAGTTTCTGCGAGAATGATGATTCATCAGATGTAGAAACACTTCTTGCTGTGGGAGAGGGAGCGATTCATAAGAAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAAGCTCCGTGAAGCCGTAATCAAAGCTGATTTCTGGCTGCTTTGGTTCTTGTACTTCCTCGGGGTCGGTCCAGGAATAACAATTCTCAACAATTTGTCTCAAATTGGGATTTCATTAGGTGTTAATGACACAACATTGCTGTTGGCTCTTTTCAGCTTTTGCAATTTTGTCGGTCGTCTAGGCTCTGGTGTTATTTCCGAACACTTTGTCAGGTCAAGAATGATACCTCGCTCACTGTGGATGATGTTTGCACTAATACTCATGGCTATAGCATTCCTCCTGTATGCATCTGCTCTCACGGGTACTCTCTACGTCGCCACTGGTTTAACTGGAATCAGCTACGGAGTTCTGTACTCTATGATGGTCCCTCTCGCATCTGAGATTTTTGGTCTAAAGAATTTTGGAGTAATCTTCAACTTCATGCAGCTGGGGAATCCAATAGGAGCAGTCCTTTTCTCAGTTCTACTCGCCAGTACTCTATACGACAACGAAGCTGCTAAGCAAGGTTCGATAACCTGCATAGGCCAACAGTGCTTCAGGACGACTTTCTTCATCCTTTCGGGCGTTGCTGGGTTAGGTTCGATCGTGAGCATGATTCTGACTGTTAGATTAAGGCCAGTCTATCAAATGCTATACTCCGGTGGCTCGTTCCGCTTGCCTCAAAGTTCAGGTCATTGA 1698 44.35 MPKLVLKGGSRPPWVGLAAAVWVQIAGGSSYNFSLYSHLLKSVLGLNQQQLTVLGVANDIGESMGLVPGLACNRFPPWVILLFGAFCCFLGYGAIWLAVSRTVPNLPYWLLWITHCIATNSNAWFGTAVLVTNMRNFPLSRGTVAGILKGYVGLSAAVYTVIYSMVLKKSALNLLLFLAIGIPILCLALMYFVRPCTPASSEDPSERAHFLFTQAACVLLAVFLVSTTILDATTTPSDAVGYTLVAIMVILLMSPLAVPIKMTICAKSKKLGPRVDSAEPLASGESDSSQIEPLLTPSSSATNLGSFCENDDSSDVETLLAVGEGAIHKKKRRPKRGEDFKLREAVIKADFWLLWFLYFLGVGPGITILNNLSQIGISLGVNDTTLLLALFSFCNFVGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASALTGTLYVATGLTGISYGVLYSMMVPLASEIFGLKNFGVIFNFMQLGNPIGAVLFSVLLASTLYDNEAAKQGSITCIGQQCFRTTFFILSGVAGLGSIVSMILTVRLRPVYQMLYSGGSFRLPQSSGH 565
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 27224077 27227776 - ClG42_07g0123600.10 Clacu07g1236 253834
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1236 565 MobiDBLite consensus disorder prediction 282 298 - -
Clacu07g1236 565 SUPERFAMILY MFS general substrate transporter 13 199 IPR036259 -
Clacu07g1236 565 Gene3D MFS general substrate transporter like domains 7 275 IPR036259 -
Clacu07g1236 565 Gene3D MFS general substrate transporter like domains 346 548 IPR036259 -
Clacu07g1236 565 MobiDBLite consensus disorder prediction 274 298 - -
Clacu07g1236 565 Pfam Major Facilitator Superfamily 355 545 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu07g1236 565 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 13 548 - GO:0016020(PANTHER)
Clacu07g1236 565 CDD MFS_Mch1p_like 12 533 - -
Clacu07g1236 565 Pfam Nodulin-like 13 260 IPR010658 -
Clacu07g1236 565 SUPERFAMILY MFS general substrate transporter 332 546 IPR036259 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0446 Clacu-Chr2:4040062 Clacu07g1236 Clacu-Chr7:27224077 2.90E-83 dispersed
Clacu07g1236 Clacu-Chr7:27224077 Clacu11g0925 Clacu-Chr11:8935009 2.40E-92 dispersed
Clacu07g1236 Clacu-Chr7:27224077 Clacu02g1212 Clacu-Chr2:24605836 1.10E-92 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1236 - - - 0.0