Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu07g1308 | ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGCCGGTGGAATCGGCGGTGTCGCCGGCATCGTCTCCGGCTACCCACTCGACACCCTTCGCATCCGTCAACAACACTCCACCTCCGGCTCCGCCATCAGCGTCCTCCGTAACATCATGTCCAACGGCGGCCCCGCCGCCCTCTACAGAGGAATGGGAGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCATTGTTTTCCAGACCAACGCCGTGCTCTGCAGAGCGTTCGATCCAGCGGCGACAGACAACCGTCCACCGTCGTACAAGGCGGTAGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTGATTTTAACACCGGTGGAGCTCGTGAAAATCCGTCTTCAATTACAGGACTTGGGTTCATCAAATCACACAGATCTGAGTTCATCTCGGCTCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAAAGGGCTATACAGAGGCTTAACAATCACAATGCTAAGAGACGCTCCTTCCCATTGCTTTTACTTTTGGACTTACGAATTCATGAGAGAAAAGCTTCATCCCGGTTGTAGAAAATCAGGGCAAGAGACGTTGAGAACGATGCTGGTAGCCGGAGGACTCGCCGGCGTCGCCAGTTGGGTTTGTTGTTACCCATTGGATGTAGTTAAAACCAGACTTCAAGCTCAATCGAAATTCACGTTTCAAAAGTACAGTGGAATTGTGGATTGTTTCTACAAGAGCGTGAAAGAAGAAGGGTACAGTGTTTTATGGCGTGGATTAGGAACCGCCATAGCTAGAGCTTTTGTGGTGAATGGAGCCATTTTTTCTGCTTATGAACTCAGTTTGAGATGTCTATCCAACAATGGAGGATTTCATGCTGAAAATACCATTTGA | 930 | 50.32 | MDFWPEFLASSWGKEFVAGGIGGVAGIVSGYPLDTLRIRQQHSTSGSAISVLRNIMSNGGPAALYRGMGAPLASVTFQNAIVFQTNAVLCRAFDPAATDNRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGSSNHTDLSSSRLGPMQVAKNIFKTEGYKGLYRGLTITMLRDAPSHCFYFWTYEFMREKLHPGCRKSGQETLRTMLVAGGLAGVASWVCCYPLDVVKTRLQAQSKFTFQKYSGIVDCFYKSVKEEGYSVLWRGLGTAIARAFVVNGAIFSAYELSLRCLSNNGGFHAENTI | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 27906342 | 27907424 | + | ClG42_07g0130800.10 | Clacu07g1308 | 253906 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu07g1308 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 197 | IPR018108 | - | |
| Clacu07g1308 | 309 | SUPERFAMILY | Mitochondrial carrier | 11 | 291 | IPR023395 | - | |
| Clacu07g1308 | 309 | Gene3D | Mitochondrial carrier domain | 9 | 304 | IPR023395 | - | |
| Clacu07g1308 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 10 | 92 | IPR018108 | - | |
| Clacu07g1308 | 309 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 8 | 298 | IPR050567 | GO:0006810(PANTHER)|GO:0022857(PANTHER) | |
| Clacu07g1308 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 208 | 296 | IPR018108 | - | |
| Clacu07g1308 | 309 | PRINTS | Mitochondrial carrier protein signature | 170 | 188 | IPR002067 | GO:0055085(InterPro) | |
| Clacu07g1308 | 309 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085(InterPro) | |
| Clacu07g1308 | 309 | PRINTS | Mitochondrial carrier protein signature | 118 | 136 | IPR002067 | GO:0055085(InterPro) | |
| Clacu07g1308 | 309 | PRINTS | Mitochondrial carrier protein signature | 217 | 239 | IPR002067 | GO:0055085(InterPro) | |
| Clacu07g1308 | 309 | Pfam | Mitochondrial carrier protein | 109 | 198 | IPR018108 | - | |
| Clacu07g1308 | 309 | Pfam | Mitochondrial carrier protein | 211 | 299 | IPR018108 | - | |
| Clacu07g1308 | 309 | Pfam | Mitochondrial carrier protein | 11 | 87 | IPR018108 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu07g1308 | Clacu-Chr7:27906342 | Clacu09g1217 | Clacu-Chr9:12235511 | 3.60E-45 | dispersed | |
| Clacu10g2190 | Clacu-Chr10:35013085 | Clacu07g1308 | Clacu-Chr7:27906342 | 3.80E-26 | transposed | |
| Clacu07g1308 | Clacu-Chr7:27906342 | Clacu09g0209 | Clacu-Chr9:1931961 | 6.30E-127 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu07g1308 | K15109 | - | csv:101222749 | 602.823 |