Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu07g1367 | ATGGATTGTTTGTGGATATTTGTGCAGCTCATCACAGCTGCAGCTTTCATATCTTCCACAATCATAATCCTGAAAAGCTTCATCAACCCCACCACAGCACCACCATCATCATCTTCAAACTCCCCCTCCTCCAACAATAACCCTTCACTTCCTTCTGGTTCCCTCGGTCTCCCCTTGGTCGGTGAAACCCTCCACTTCGTCTCTTCCGCTTACTCTCACCGCCCCGACACCTTCATGGACACACGTCGCCAACGGTATGGAAAGGTTTTCAAATCACATATATTTGGAAGTCCAACAATAGTTTCAACTGATGCTGAAGTCAATAGGTTTATTCTACAAAGTGATGCAAAGGTTTTTGTACCATCTTATCCAAAATCTGTGACAGAGTTGATGGGAAAATCTTCTATATTGCTCATTAATGGCAGTTTGCATAGAAGAATTCATGGCCTTATTGGAGCATTTTTCAAGTCATCTCATCTCAAAGCTCAAGTAACCATAGACATGCAGAAATATCTTCAAAAATCCATCTCTACTTGGACTAATACTTGTCAACACAATCCTGTCCACATACAAGATGAAGCCAAAAATATTGCCTTTGAAATACTAGTAAAGACACTGATCAGTTTGGAAGCTGGTGAAGAAATGGAATTTCTCAAGAAACAGTTTAATGAATTCATTGCTGGGATTATGGCTTTCCCAATAAACATCCCAGGAAGCAGACTTTACCGATCATTACAGGCGAAAAGGAAAATGGTTAAGTTAGTGAAAGAAATAATAGAAGGAAGAAGAAAGAAGATGGGTGAGAAATTGAATAAGGCAGTCCCATTGAATGATGTTGTGGATGTTTTGGTGAATGATGGAAGCCAACAAGTTACAAATGAACTAATAGCAGATAATATGATTGATATGATGATTCCAGGCCAAGATTCTGTCCCAATTCTTATCACTTTGGCTATTAAATACCTTTCAGATTCCCCATCTGCCCTTCAACGATTAGTGGTCATAACAGAGACGTTAAGGATAGGAAACATAATAACAGGAGTGATGAGAAAGGCGATGAAAGACATTGAGATAAAAGGGTATTTAATACCTAAAGGATGGTGTGTCCTTGCATATATTAGGTCAGTTCATGTTGATGAAAACCACTTCCAAACCCCTTACCATTTCAATCCATGGAGATGGCAGGATAAAGACTCAAACAACTCCAATTTTACTCCTTTTGGAGGAGGACAAAGGTTGTGCCCTGGACTTGAATTAGCTCGACTAGAAGCTTCAATTTTCTTACATCACTTCGTTACTGAATTCAGGTGGGTGGCTGAGGAAGACAATATTATCAACTTCCCAACAGTAAGGATGAAGAACAAAATGACAATTTGGGTCAAGAAGAGAGAGCATTAA | 1398 | 39.48 | MDCLWIFVQLITAAAFISSTIIILKSFINPTTAPPSSSSNSPSSNNNPSLPSGSLGLPLVGETLHFVSSAYSHRPDTFMDTRRQRYGKVFKSHIFGSPTIVSTDAEVNRFILQSDAKVFVPSYPKSVTELMGKSSILLINGSLHRRIHGLIGAFFKSSHLKAQVTIDMQKYLQKSISTWTNTCQHNPVHIQDEAKNIAFEILVKTLISLEAGEEMEFLKKQFNEFIAGIMAFPINIPGSRLYRSLQAKRKMVKLVKEIIEGRRKKMGEKLNKAVPLNDVVDVLVNDGSQQVTNELIADNMIDMMIPGQDSVPILITLAIKYLSDSPSALQRLVVITETLRIGNIITGVMRKAMKDIEIKGYLIPKGWCVLAYIRSVHVDENHFQTPYHFNPWRWQDKDSNNSNFTPFGGGQRLCPGLELARLEASIFLHHFVTEFRWVAEEDNIINFPTVRMKNKMTIWVKKREH | 465 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 28484042 | 28489820 | - | ClG42_07g0136700.10 | Clacu07g1367 | 253965 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu07g1367 | 465 | SUPERFAMILY | Cytochrome P450 | 48 | 463 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | Gene3D | Cytochrome P450 | 39 | 463 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | CDD | CYP90-like | 82 | 458 | - | - | |
| Clacu07g1367 | 465 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 407 | 416 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu07g1367 | 465 | PRINTS | E-class P450 group I signature | 414 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | PRINTS | E-class P450 group I signature | 404 | 414 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | PRINTS | E-class P450 group I signature | 372 | 396 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | PRINTS | E-class P450 group I signature | 83 | 102 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | Pfam | Cytochrome P450 | 334 | 443 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | Pfam | Cytochrome P450 | 51 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu07g1367 | 465 | PANTHER | CYTOCHROME P450 26 | 50 | 435 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g2056 | Clacu-Chr1:32352584 | Clacu07g1367 | Clacu-Chr7:28484042 | 3.10E-115 | dispersed | |
| Clacu07g1367 | Clacu-Chr7:28484042 | Clacu11g0638 | Clacu-Chr11:6110154 | 1.40E-69 | dispersed | |
| Clacu07g1367 | Clacu-Chr7:28484042 | Clacu09g0062 | Clacu-Chr9:628159 | 2.70E-169 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu07g1367 | K12638 | - | csv:101212581 | 763.066 |